Chr:
Chr3
Start:
7799985
End:
7800005
Strand:
+
Sequence:
ACUCGUCGCCGGCGACCACAG
Length:
21
precursor sequence:
GGGGGUGCCGUACGGCGGCUGUGGUCGCCGGCGGUGGUCGCGGGGGCAAGGGCAGGGGCGGGCGGCGAGGACAAUGAUGGACGACGGGGAAGAUAGCGACAGGCGCCCGCCGCUUGCCGCUUACUGGCGUCGCGCGCGCGCAUGCACAUGUCCUCCUCCCCUCGUAGCCGCUCGCCGGAGCAGUCCUCCCCUCGUCGCGCACUCGUCGCCGGCGACCACAGCUGCUGUCCGGCUCCCCUCU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
19
NEP:
6.93%
LE_num:
LEP:
4.38%
ME_num:
MEP:
79.56%
HE_num:
HEP:
9.12%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.75
Avg Expression:
10.75
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | 1.93081753401728 | 0.00898609479300688 |
| 2 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_late | 1.38305599119162 | 0.000116347425409897 |