Chr:
Chr6
Start:
24608747
End:
24608767
Strand:
-
Sequence:
AGGACGAAGCACACACGGCUG
Length:
21
precursor sequence:
UGGGAUCCAACAGAUGAGAAGCUGUACUGCUACGUACUGCCCUAACAGGACGAAGCACACACGGCUGCAAACUGAAGGAAGCACAUG
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
203
NEP:
74.09%
LE_num:
LEP:
2.19%
ME_num:
MEP:
15.33%
HE_num:
HEP:
8.39%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
panicle
Tau :
0.98
Avg Expression:
34.79
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | zhonghua11 // panicle // wild-type--/--zhonghua11 // panicle // rdr701-1 mutant | -3.08028831854074 | 1.63715439880787e-07 |