RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR5151	PmiREN	Chr5	3661607	3661627	-	Y/N
Osa-miR1130	PmiREN	Chr3	24748148	24748167	+	N/N
Osa-miRN2331	PmiREN	Chr9	9324615	9324635	+	N/Y
Osa-miRN2267d	PmiREN	Chr6	11137339	11137359	+	N/Y
Osa-miRN2308	PmiREN	Chr9	8761068	8761088	+	N/Y
Osa-miR820a	PmiREN	Chr1	14130483	14130504	+	Y/N
Osa-miRN2267a	PmiREN	Chr10	11705913	11705933	+	N/Y
Osa-miR820c	PmiREN	Chr10	6928685	6928708	+	Y/N
Osa-miR820b	PmiREN	Chr7	13120702	13120725	-	Y/N
Osa-miRN2302	PmiREN	Chr5	8249359	8249379	+	N/Y
Osa-miRN2301	PmiREN	Chr1	11883749	11883769	-	N/Y
Osa-miRN2300	PmiREN	Chr1	34289922	34289942	+	Y/Y
Osa-miRN2307	PmiREN	Chr8	17084861	17084881	+	N/Y
Osa-miRN2306	PmiREN	Chr8	1202343	1202363	+	N/Y
Osa-miRN2305	PmiREN	Chr7	6722807	6722827	-	N/Y
Osa-miRN2304	PmiREN	Chr6	24723463	24723483	-	Y/Y
Osa-miRN2328	PmiREN	Chr6	9669276	9669296	-	Y/Y
Osa-miR1850	PmiREN	Chr5	26275302	26275322	-	Y/N
Osa-miR5512	PmiREN	Chr4	18386989	18387009	-	Y/N
Osa-miRN45b	PmiREN	Chr9	11946580	11946599	-	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR5151

PmiREN

Chr5