Chr:
Chr5
Start:
26275302
End:
26275322
Strand:
-
Sequence:
UGGAAAGUUGGGAGAUUGGGG
Length:
21
precursor sequence:
AUGAUGUGAUGGAGAUGCGAUGGAAAGUUGGGAGAUUGGGGGAAGUUGUGUGUGAACUAAACGUGGAUUGGGGCCCUGUUUAGUUCACAUCAAUCUUCCUCCAAAUUCCCAACUUUUCAUCACAUCACAAUCACAUAAACU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
12
NEP:
4.38%
LE_num:
LEP:
4.74%
ME_num:
MEP:
47.45%
HE_num:
HEP:
43.43%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
lamina_joint
Tau :
0.84
Avg Expression:
207.91
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | HT54 // leaves // 45C, 0h--/--HT54 // leaves // 45C, 12h | -5.03691685030434 | 0.0100592183265211 |
| 2 | HT54 // leaves // 45C, 0h--/--HT54 // leaves // 45C, 24h | -3.27092039635086 | 0.00291349466261319 |
| 3 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_late | 1.07900586631469 | 1.21761078553684e-05 |
| 4 | none // leaves // WT, Control--/--none // leaves // DCL1a mutant, Control | 5.11860134309981 | 3.90151562348043e-06 |
| 5 | none // leaves // DCL1a mutant, Control--/--none // leaves // DCL1a mutant, M. oryzae Infected | -4.11836493036371 | 0.0182820091988162 |