Chr:
Chr6
Start:
24723463
End:
24723483
Strand:
-
Sequence:
CAUGCCCUUUAUCUGUCGCCU
Length:
21
precursor sequence:
CAACCAGUGAAGCUAGGAGAACAUGUUAGAUGGGCAUGCAGCAAGCUGUGCAGCGAGCGGCCUUGAGUGUGGGUGUGGUUAGAAGAGAUCAAUGUGUUGAUGCCGCCUCGAUGCCACAAUGCCCGGCUGGUGAUGGAACCCUCUCCAUGGUGCUAUAACCCUGCGCAAAAUUUCCAUUUUUCCACUGAAAAGGAGCAUGGUUUGGAACAUGCCCUUUAUCUGUCGCCUAGCCUUGAGUUCCUGGUGCCUC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
212
NEP:
77.37%
LE_num:
LEP:
2.92%
ME_num:
MEP:
9.49%
HE_num:
HEP:
10.22%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pollen
Tau :
0.94
Avg Expression:
48.00
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | -2.01300876783686 | 0.0250878166651119 |