RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR531c	PmiREN	Chr11	26930692	26930713	+	Y/N
Osa-miR531d	PmiREN	Chr2	18431799	18431820	+	Y/N
Osa-miR2275j	PmiREN	Chr8	3736692	3736712	-	Y/Y
Osa-miR11337n	PmiREN	Chr7	19603623	19603643	+	Y/N
Osa-miR398	PmiREN	Chr7	14598627	14598647	-	Y/Y
Osa-miR399d	PmiREN	Chr6	1561791	1561812	+	Y/N
Osa-miR399l	PmiREN	Chr6	20890950	20890970	+	Y/Y
Osa-miR399j	PmiREN	Chr4	28873196	28873215	+	Y/N
Osa-miRN2347	PmiREN	Chr6	4789408	4789428	+	N/N
Osa-miRN2346	PmiREN	Chr5	6099540	6099560	+	N/Y
Osa-miRN2345	PmiREN	Chr4	21226048	21226068	-	N/Y
Osa-miRN2344	PmiREN	Chr3	27635975	27635995	+	N/N
Osa-miRN2343	PmiREN	Chr3	26841668	26841688	+	N/Y
Osa-miRN2342	PmiREN	Chr2	18533094	18533114	+	N/N
Osa-miRN2341	PmiREN	Chr2	12299897	12299917	+	N/N
Osa-miRN2340	PmiREN	Chr1	13885903	13885923	-	N/Y
Osa-miR418	PmiREN	Chr2	35182640	35182663	-	N/N
Osa-miRN2349	PmiREN	Chr9	6623796	6623816	+	N/Y
Osa-miRN2348	PmiREN	Chr7	17339271	17339291	-	N/N
Osa-miR164d	PmiREN	Chr2	33143631	33143650	-	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR531c

PmiREN

Chr11