RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miRN2303a	PmiREN	Chr6	13311859	13311879	+	N/Y
Osa-miRN2319	PmiREN	Chr12	24317901	24317921	+	Y/Y
Osa-miRN2283a	PmiREN	Chr11	4416847	4416867	+	Y/N
Osa-miRN2255	PmiREN	Chr11	27317151	27317171	+	N/Y
Osa-miRN2257	PmiREN	Chr11	1020771	1020791	-	Y/N
Osa-miRN2164a	PmiREN	Chr12	18944486	18944506	-	Y/N
Osa-miRN2259	PmiREN	Chr5	25503014	25503034	+	Y/N
Osa-miRN2258	PmiREN	Chr11	19306983	19307003	+	N/N
Osa-miR11343e	PmiREN	Chr3	2591086	2591107	-	N/N
Osa-miR11343d	PmiREN	Chr2	1861077	1861098	-	Y/N
Osa-miR11343c	PmiREN	Chr9	22883315	22883336	-	N/N
Osa-miR11343b	PmiREN	Chr7	25160299	25160320	-	N/N
Osa-miRN2317	PmiREN	Chr12	21907561	21907581	-	N/Y
Osa-miRN2164d	PmiREN	Chr2	34255126	34255146	-	Y/N
Osa-miRN2164e	PmiREN	Chr6	7075522	7075542	-	Y/N
Osa-miR5504	PmiREN	Chr10	17228178	17228197	-	Y/N
Osa-miR812d	PmiREN	Chr3	26459657	26459676	+	Y/N
Osa-miR812e	PmiREN	Chr3	14377303	14377322	-	Y/N
Osa-miR812a	PmiREN	Chr10	406243	406264	+	Y/N
Osa-miR812b	PmiREN	Chr2	1936345	1936370	-	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miRN2303a

PmiREN

Chr6