Chr:
Chr12
Start:
24317901
End:
24317921
Strand:
+
Sequence:
GAGGAUGUAGUCGUGUAGGUG
Length:
21
precursor sequence:
CGCCGGGAAUUUCACAAGUAUUCUACAUGACAUAUCGUCUUCAAGAUUUUGAAAGUGGCGUUUGGCCUAGGAGGCAUCAGGACUUCUCAUGUCAGAGGAUGUAGUCGUGUAGGUGCUGACUGCCAAGCCAGUGCC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
200
NEP:
72.99%
LE_num:
LEP:
3.65%
ME_num:
MEP:
11.68%
HE_num:
HEP:
11.68%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
pollen
Tau :
0.94
Avg Expression:
36.80
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | PB1 // panicle // WT--/--PB1 // panicle // KD_AGO17 | 1.47093185977602 | 0.0276899516239029 |