RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR2275a	PmiREN	Chr8	1205021	1205041	+	N/N
Osa-miR2275b	PmiREN	Chr8	1202505	1202525	+	N/N
Osa-miR2275c	PmiREN	Chr7	16719850	16719870	-	Y/Y
Osa-miR444c	PmiREN	Chr4	23053533	23053555	-	Y/N
Osa-miR444b	PmiREN	Chr2	22303630	22303652	-	Y/N
Osa-miR2275h	PmiREN	Chr8	4384923	4384944	-	N/Y
Osa-miR2275i	PmiREN	Chr7	16719646	16719666	-	Y/Y
Osa-miR444d	PmiREN	Chr2	30463327	30463349	-	Y/N
Osa-miRN2222	PmiREN	Chr12	13410165	13410185	+	Y/Y
Osa-miRN221b	PmiREN	Chr12	5611048	5611067	-	Y/N
Osa-miRN2276f	PmiREN	Chr8	3982102	3982122	-	Y/N
Osa-miRN2316	PmiREN	Chr11	20564657	20564677	+	N/N
Osa-miRN2329	PmiREN	Chr6	9654155	9654175	+	N/Y
Osa-miRN2276d	PmiREN	Chr5	14765998	14766018	-	Y/N
Osa-miR156k	PmiREN	Chr9	18289183	18289202	-	N/N
Osa-miR156j	PmiREN	Chr6	26554835	26554855	+	Y/Y
Osa-miR156h	PmiREN	Chr6	27388145	27388164	+	N/N
Osa-miR5143	PmiREN	Chr1	8417119	8417142	-	Y/N
Osa-miR156f	PmiREN	Chr8	21478232	21478252	+	Y/Y
Osa-miR156d	PmiREN	Chr2	4512974	4512994	-	Y/Y

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR2275a

PmiREN

Chr8