RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR11339e	PmiREN	Chr6	6835136	6835156	+	N/N
Osa-miR11339b	PmiREN	Chr6	30763690	30763710	-	N/N
Osa-miR11339c	PmiREN	Chr6	21843016	21843036	-	N/N
Osa-miR11339a	PmiREN	Chr8	10041686	10041706	+	Y/N
Osa-miR11339n	PmiREN	Chr9	8881628	8881648	-	N/N
Osa-miR11339o	PmiREN	Chr9	915192	915212	-	N/N
Osa-miR11339l	PmiREN	Chr1	29242336	29242356	+	N/N
Osa-miR11339m	PmiREN	Chr8	26541373	26541393	+	N/N
Osa-miR5337b	PmiREN	Chr3	35885492	35885511	-	N/N
Osa-miR11339k	PmiREN	Chr5	176940	176963	+	N/N
Osa-miR11339h	PmiREN	Chr4	27611219	27611238	+	Y/N
Osa-miR11339v	PmiREN	Chr2	6014598	6014619	-	N/N
Osa-miR11339w	PmiREN	Chr3	11400500	11400521	-	N/N
Osa-miR11339t	PmiREN	Chr5	22998595	22998615	+	Y/N
Osa-miR11339u	PmiREN	Chr11	25244496	25244516	+	Y/N
Osa-miR11339r	PmiREN	Chr6	28992325	28992345	+	Y/N
Osa-miR11339s	PmiREN	Chr7	19380588	19380608	+	Y/N
Osa-miR11339p	PmiREN	Chr1	11324633	11324656	-	N/N
Osa-miR11339q	PmiREN	Chr12	16041754	16041774	-	Y/N
Osa-miR11339z	PmiREN	Chr6	8084212	8084233	+	N/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR11339e

PmiREN

Chr6