RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miRN2195b	PmiREN	Chr3	26422902	26422922	-	N/N
Osa-miRN2195c	PmiREN	Chr3	7617391	7617411	-	N/N
Osa-miR2863a	PmiREN	Chr2	29869574	29869597	+	Y/Y
Osa-miR2873d	PmiREN	Chr2	18373566	18373586	-	N/N
Osa-miR2873e	PmiREN	Chr3	32963518	32963538	-	N/N
Osa-miR2873f	PmiREN	Chr7	21640013	21640034	+	Y/N
Osa-miR2873c	PmiREN	Chr7	27503531	27503553	+	N/N
Osa-miRN2372	PmiREN	Chr11	24569670	24569690	-	N/Y
Osa-miR395q	PmiREN	Chr4	32622716	32622736	+	Y/N
Osa-miRN2370	PmiREN	Chr10	11863830	11863850	+	N/Y
Osa-miR5795a	PmiREN	Chr9	11103946	11103967	-	Y/N
Osa-miRN2376	PmiREN	Chr5	13976622	13976642	+	N/Y
Osa-miRN2377	PmiREN	Chr6	28293791	28293811	+	N/Y
Osa-miRN2374	PmiREN	Chr3	26834061	26834081	+	N/N
Osa-miRN2375	PmiREN	Chr4	17474475	17474495	-	N/N
Osa-miR814	PmiREN	Chr11	6537593	6537612	+	Y/N
Osa-miR5795d	PmiREN	Chr7	7703345	7703366	+	Y/N
Osa-miR11339f	PmiREN	Chr9	7974442	7974462	-	N/N
Osa-miR11339g	PmiREN	Chr9	7233194	7233214	-	N/N
Osa-miR11339d	PmiREN	Chr6	9408438	9408458	-	N/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miRN2195b

PmiREN

Chr3