RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR5819c	PmiREN	Chr6	8845536	8845556	+	N/N
Osa-miR11337o	PmiREN	Chr7	1830200	1830220	-	Y/N
Osa-miRN2315	PmiREN	Chr11	16391272	16391292	+	N/Y
Osa-miRN221e	PmiREN	Chr6	23591716	23591735	+	Y/N
Osa-miR5819a	PmiREN	Chr1	29695852	29695872	+	N/N
Osa-miR11337a	PmiREN	Chr8	1665252	1665273	-	Y/N
Osa-miR11337b	PmiREN	Chr12	7127106	7127126	+	Y/N
Osa-miRN2322	PmiREN	Chr2	12296437	12296457	+	N/Y
Osa-miR11337c	PmiREN	Chr1	42763684	42763704	+	Y/N
Osa-miRN2230	PmiREN	Chr9	13753101	13753122	+	Y/N
Osa-miR11341	PmiREN	Chr9	22895230	22895251	-	Y/N
Osa-miR11337d	PmiREN	Chr5	24705913	24705933	+	Y/N
Osa-miR170	PmiREN	Chr3	21191693	21191713	+	Y/N
Osa-miRN2373a	PmiREN	Chr1	32966906	32966926	-	N/N
Osa-miRN2330	PmiREN	Chr9	9298242	9298262	+	N/Y
Osa-miRN2373d	PmiREN	Chr9	11323120	11323140	+	N/N
Osa-miR11337e	PmiREN	Chr10	17680744	17680764	-	Y/N
Osa-miR11337f	PmiREN	Chr10	6253608	6253628	-	N/N
Osa-miR10519	PmiREN	Chr2	21239830	21239853	-	Y/N
Osa-miRN2267c	PmiREN	Chr1	28420010	28420030	-	N/Y

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR5819c

PmiREN

Chr6