RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miRN2265	PmiREN	Chr11	11438936	11438957	+	N/N
Osa-miR9664	PmiREN	Chr11	7342344	7342364	-	Y/N
Osa-miR1869	PmiREN	Chr4	21644960	21644982	+	N/N
Osa-miRN2337	PmiREN	Chr12	21000978	21000998	+	N/Y
Osa-miR1863	PmiREN	Chr12	4869464	4869489	+	Y/Y
Osa-miR1865	PmiREN	Chr3	34000705	34000726	+	Y/N
Osa-miRN2373b	PmiREN	Chr5	27494437	27494457	+	N/N
Osa-miR167g	PmiREN	Chr3	3347692	3347713	+	Y/N
Osa-miR167f	PmiREN	Chr10	14723125	14723146	-	Y/N
Osa-miR167d	PmiREN	Chr7	4166373	4166394	-	Y/N
Osa-miR167j	PmiREN	Chr1	32686181	32686202	-	Y/N
Osa-miR167h	PmiREN	Chr12	25480628	25480649	+	Y/N
Osa-miR395a	PmiREN	Chr4	31805504	31805523	-	Y/N
Osa-miR395b	PmiREN	Chr4	31805343	31805363	-	Y/N
Osa-miR395c	PmiREN	Chr4	31805203	31805224	-	Y/N
Osa-miR395e	PmiREN	Chr4	31804922	31804943	-	Y/N
Osa-miR395f	PmiREN	Chr8	3299895	3299915	+	Y/N
Osa-miR395g	PmiREN	Chr4	31804642	31804662	-	Y/N
Osa-miR395h	PmiREN	Chr8	3299226	3299246	+	Y/N
Osa-miR395j	PmiREN	Chr8	3299560	3299581	+	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miRN2265

PmiREN

Chr11