Chr:
Chr11
Start:
7342344
End:
7342364
Strand:
-
Sequence:
AUGCAGUCCUCGAUGUCGUAG
Length:
21
precursor sequence:
AGCGGUGGACGAACAGAUCUAUGCAGUCCUCGAUGUCGUAGGCGAGCUCCCGGAUCUCCUUUACCCAUGCCCUCCUCAGCUUGUCCGGGUCGUCAUCCAUGGACGCGUACUGCUCCACCGCGAGGUUGAU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
142
NEP:
51.82%
LE_num:
LEP:
12.41%
ME_num:
MEP:
35.4%
HE_num:
HEP:
0.36%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
shoot
Tau :
0.83
Avg Expression:
2.73
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf_sheath // S_bph feeding--/--BPH6-transgenic line // leaf_sheath // R_bph | -6.84072070667408 | 9.30130975079508e-07 |
| 2 | Nipponbare // leaf_sheath // S_bph feeding--/--Nipponbare // leaf_sheath // S_bph feeding_early | -6.52036802400814 | 7.28871707046099e-06 |
| 3 | BPH6-transgenic line // leaf_sheath // R_bph--/--BPH6-transgenic line // leaf_sheath // R_bph_late | 6.6290006848888 | 5.73377894351781e-06 |