RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR11337t	PmiREN	Chr7	2096379	2096400	-	Y/N
Osa-miR5801d	PmiREN	Chr12	1024710	1024729	+	Y/N
Osa-miR5801e	PmiREN	Chr1	18014203	18014222	-	Y/N
Osa-miR5801j	PmiREN	Chr8	20607786	20607806	+	N/N
Osa-miR5801k	PmiREN	Chr5	16046868	16046887	+	Y/N
Osa-miR5801h	PmiREN	Chr6	28888188	28888208	+	N/N
Osa-miR5801i	PmiREN	Chr7	21370921	21370941	+	N/N
Osa-miR5801n	PmiREN	Chr4	21147864	21147884	+	Y/N
Osa-miR1878	PmiREN	Chr9	16555575	16555598	+	Y/N
Osa-miR5801l	PmiREN	Chr8	26861955	26861975	-	Y/N
Osa-miR5801m	PmiREN	Chr3	1824711	1824731	-	N/N
Osa-miR5801r	PmiREN	Chr6	26032953	26032972	+	N/N
Osa-miRN2195a	PmiREN	Chr1	7494658	7494678	+	N/N
Osa-miR5801p	PmiREN	Chr4	6449699	6449720	+	Y/N
Osa-miR5801q	PmiREN	Chr12	8866352	8866371	+	N/N
Osa-miRN2268a	PmiREN	Chr12	22206661	22206681	-	Y/N
Osa-miRN2268b	PmiREN	Chr2	10627710	10627730	+	Y/N
Osa-miRN2373c	PmiREN	Chr8	5571357	5571377	+	N/N
Osa-miR2090	PmiREN	Chr1	38764362	38764387	-	Y/N
Osa-miR2905	PmiREN	Chr1	24415931	24415952	+	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR11337t

PmiREN

Chr7