Chr:
Chr12
Start:
22206661
End:
22206681
Strand:
-
Sequence:
CCGCCGACGCCGACAGGAGCU
Length:
21
precursor sequence:
CAUGUCUGGAGUUGCUGCCGCCGCUAUUGGCGGAGGUGGUGCGCCGCCGCCGACGCCGACAGGAGCUGGAUCCGGAGCUGGUGCGCC
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
116
NEP:
42.34%
LE_num:
LEP:
13.5%
ME_num:
MEP:
36.13%
HE_num:
HEP:
8.03%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
blade
Tau :
0.90
Avg Expression:
26.66
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | Nipponbare // leaf_sheath // S_bph feeding--/--Nipponbare // leaf_sheath // S_bph feeding_early | 1.4665122723689 | 0.00621647548837626 |