RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
osa-miR812a	miRbase	Chr1	33947325	33947346	+	N/N
osa-miR812b	miRbase	Chr2	1936332	1936353	-	N/N
osa-miR812c	miRbase	Chr6	26260440	26260461	+	N/N
osa-miR812d	miRbase	Chr7	22395351	22395372	+	N/N
osa-miR812e	miRbase	Chr8	16401286	16401307	+	N/N
osa-miR814a	miRbase	Chr1	22375048	22375069	+	Y/N
osa-miR814b	miRbase	Chr2	26341222	26341243	+	Y/N
osa-miR814c	miRbase	Chr2	10889722	10889743	-	Y/N
osa-miR815a	miRbase	Chr5	29746690	29746710	+	Y/N
osa-miR815b	miRbase	Chr5	14992306	14992326	+	N/N
osa-miR815c	miRbase	Chr7	5426888	5426908	-	N/N
osa-miR816	miRbase	Chr10	21808335	21808354	+	N/N
osa-miR817	miRbase	Chr2	12276369	12276389	-	N/N
osa-miR818a	miRbase	Chr1	40415538	40415559	+	N/N
osa-miR818b	miRbase	Chr2	4007278	4007299	+	N/N
osa-miR818c	miRbase	Chr2	35928879	35928900	+	N/N
osa-miR818d	miRbase	Chr4	34969181	34969202	-	N/N
osa-miR818e	miRbase	Chr7	28154435	28154456	-	N/N
osa-miR820a	miRbase	Chr1	14130483	14130503	+	Y/N
osa-miR820b	miRbase	Chr7	13120705	13120725	-	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

osa-miR812a

miRbase

Chr1