Chr:
Chr1
Start:
14130483
End:
14130503
Strand:
+
Sequence:
UCGGCCUCGUGGAUGGACCAG
Length:
21
precursor sequence:
UGCGUCGGCCUCGUGGAUGGACCAGGAGCUCAACAUUCCUUAAGGUUGUUCUUUCAAACCCAUACAAGGUUCCACCGCCUGCAUUGUUCCAAGAGUGUCUUGGAUGAAAGUAGGAAGUGGAACCUUGUUAGGGUUGGAACGAACUGCCUUAAGGAAGUCGAUGCUCCAGGUCCGUCCAGGAGGACGACUCA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
3
NEP:
1.09%
LE_num:
LEP:
0.73%
ME_num:
MEP:
9.49%
HE_num:
HEP:
88.69%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf
Tau :
0.80
Avg Expression:
785.65
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 4X2_En_sRNA | -1.57933063328747 | 8.8442824536318e-07 |
2 | none // endosperm // 4X_En_sRNA--/--none // endosperm // 2X4_En_sRNA | -1.07218065897951 | 0.00200825467083981 |