Chr:
Chr1
Start:
22375048
End:
22375069
Strand:
+
Sequence:
CACUUCAUAGUACAACGAAUCU
Length:
22
precursor sequence:
ACCUAGUACCGGACGAGACACUUCAUAGUACAACGAAUCUGGACAGUAAGCCUGUCCAGAUUCGUUGUACUAUGAAGUGUCAUAUCCGGUCCUAAGU
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
17
NEP:
6.2%
LE_num:
LEP:
14.23%
ME_num:
MEP:
79.2%
HE_num:
HEP:
0.36%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
ovary
Tau :
0.45
Avg Expression:
1.92
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| 1 | japonica // shoot_base // WT_base--/--japonica // shoot_base // osnrpd1ab_base | -3.0518892840728 | 2.8609464684949e-05 |