RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
osa-miR1437b-3p	miRbase	Chr8	3955932	3955955	-	Y/N
osa-miR7692-5p	miRbase	Chr1	26250210	26250233	+	N/N
osa-miR7692-3p	miRbase	Chr1	26250474	26250497	+	Y/N
osa-miR7693-5p	miRbase	Chr12	25875300	25875323	-	N/N
osa-miR7693-3p	miRbase	Chr12	25875198	25875219	-	Y/N
osa-miR7694-5p	miRbase	Chr10	18864452	18864475	-	N/N
osa-miR7694-3p	miRbase	Chr10	18864382	18864403	-	Y/N
osa-miR7695-5p	miRbase	Chr1	11667043	11667066	-	Y/N
osa-miR7695-3p	miRbase	Chr1	11666852	11666872	-	Y/Y
osa-miR1861o	miRbase	ChrUn	521065	521086	+	Y/N
osa-miR5079b	miRbase	Chr10	10916069	10916090	-	N/N
osa-miR5539b	miRbase	Chr12	20553832	20553853	-	N/N
osa-miR6249b	miRbase	Chr4	30286469	30286489	+	Y/N
osa-miR531c	miRbase	Chr11	26930692	26930715	+	Y/N
osa-miR11336-5p	miRbase	Chr1	35090297	35090320	+	Y/N
osa-miR11336-3p	miRbase	Chr1	35090379	35090403	+	N/N
osa-miR11337-5p	miRbase	Chr2	27593846	27593866	+	N/N
osa-miR11337-3p	miRbase	Chr2	27593919	27593939	+	Y/N
osa-miR11338-5p	miRbase	Chr2	34890514	34890537	+	N/N
osa-miR11338-3p	miRbase	Chr2	34890601	34890624	+	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

osa-miR1437b-3p

miRbase

Chr8