RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Confidence	Chromosome	Start	End	Strand	DE/TSE
osa-miR2924	miRbase		Chr1	11894404	11894424	+	N/N
osa-miR2925	miRbase		Chr1	25801074	25801092	+	N/N
osa-miR2926	miRbase		Chr6	11402646	11402665	+	N/N
osa-miR2927	miRbase		Chr1	37098129	37098151	+	N/N
osa-miR2928	miRbase		Chr2	6536024	6536043	+	N/N
osa-miR2929	miRbase		Chr10	1774340	1774360	-	N/N
osa-miR2930	miRbase		Chr6	8376863	8376884	+	N/N
osa-miR2931	miRbase		Chr6	1893817	1893836	+	N/N
osa-miR2932	miRbase		Chr10	10556709	10556727	+	N/N
osa-miR395x	miRbase		Chr4	32623127	32623147	+	N/N
osa-miR395y	miRbase		Chr8	3299895	3299915	+	Y/N
osa-miR812k	miRbase		none	none	none	none	Y/Y
osa-miR812l	miRbase		none	none	none	none	Y/Y
Osa-miR812m	miRbase/PmiREN	/	Chr8	20574810	20574833	+	Y/Y
osa-miR1862f	miRbase		none	none	none	none	N/Y
Osa-miR1862g	miRbase/PmiREN	/	Chr4	20340401	20340422	-	N/Y
osa-miR3979-5p	miRbase		Chr11	19480162	19480181	+	Y/Y
osa-miR3979-3p	miRbase		Chr11	19480234	19480253	+	Y/Y
osa-miR3980a-5p	miRbase		none	none	none	none	N/N
osa-miR3980a-3p	miRbase		none	none	none	none	N/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

osa-miR2924

miRbase

Chr1