RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 113

rows per page

Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0046	XM_015766964.2	-	842	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	Y/Y
Osa-phasi01g0115	XM_015766966.2	-	837	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	Y/Y
Osa-phasi01g0158	XM_015766967.2	-	1705	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	Y/Y
Osa-phasi01g0371	XR_001547319.2	-	634	LOC4326727	Chr1	-	uncharacterized LOC4326727	Y/Y
Osa-phasi01g0380	XM_015780228.2	-	338	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0393	XM_015780228.2	-	464	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0395	XM_015780228.2	-	485	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0398	XM_015780228.2	+	508	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0400	XM_015780228.2	+	529	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0402	XM_015780228.2	-	569	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0405	XM_015780228.2	-	611	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0407	XM_015780228.2	-	632	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0409	XM_015780228.2	+	655	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0413	XM_015780228.2	+	697	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0428	XM_015780237.2	-	1444	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0431	XM_015780237.2	+	1467	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0433	XM_015780237.2	+	1488	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0435	XM_015780237.2	-	1528	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0438	XM_015780237.2	-	1570	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0440	XM_015780237.2	-	1591	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0442	XM_015780237.2	+	1614	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0446	XM_015780237.2	+	1656	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0461	XM_015780246.2	-	1439	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0464	XM_015780246.2	+	1462	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0466	XM_015780246.2	+	1483	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0468	XM_015780246.2	-	1523	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0471	XM_015780246.2	-	1565	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0473	XM_015780246.2	-	1586	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0475	XM_015780246.2	+	1609	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0479	XM_015780246.2	+	1651	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi02g0097	XM_015769612.2	+	270	LOC4329050	Chr2	+	BURP domain-containing protein 4-like	Y/Y
Osa-phasi02g0101	XM_015769612.2	+	291	LOC4329050	Chr2	+	BURP domain-containing protein 4-like	Y/Y
Osa-phasi02g0106	XM_015769612.2	+	333	LOC4329050	Chr2	+	BURP domain-containing protein 4-like	Y/Y
Osa-phasi02g0113	XM_015769612.2	+	375	LOC4329050	Chr2	+	BURP domain-containing protein 4-like	Y/Y
Osa-phasi03g0098	XR_001544388.2	+	619	LOC9267531	Chr3	+	uncharacterized LOC9267531	Y/Y
Osa-phasi03g0104	XR_001544388.2	+	682	LOC9267531	Chr3	+	uncharacterized LOC9267531	Y/Y
Osa-phasi03g0117	XR_001544388.2	-	743	LOC9267531	Chr3	+	uncharacterized LOC9267531	Y/Y
Osa-phasi03g0208	XR_003241247.1	-	1056	LOC112938208	Chr3	-	uncharacterized LOC112938208	Y/Y
Osa-phasi04g0318	XR_003241826.1	+	424	LOC112938653	Chr4	+	uncharacterized LOC112938653	Y/Y
Osa-phasi05g0032	XR_003242641.1	+	400	LOC112939107	Chr5	+	uncharacterized LOC112939107	Y/Y
Osa-phasi05g0034	XR_003242641.1	+	421	LOC112939107	Chr5	+	uncharacterized LOC112939107	Y/Y
Osa-phasi05g0036	XR_003242641.1	-	440	LOC112939107	Chr5	+	uncharacterized LOC112939107	Y/Y
Osa-phasi05g0042	XR_003242641.1	-	503	LOC112939107	Chr5	+	uncharacterized LOC112939107	Y/Y
Osa-phasi05g0045	XR_003242641.1	+	526	LOC112939107	Chr5	+	uncharacterized LOC112939107	Y/Y
Osa-phasi05g0185	XR_003242294.1	+	262	LOC112939002	Chr5	-	uncharacterized LOC112939002	Y/Y
Osa-phasi05g0187	XR_003242294.1	+	283	LOC112939002	Chr5	-	uncharacterized LOC112939002	Y/Y
Osa-phasi05g0188	XR_003242294.1	+	304	LOC112939002	Chr5	-	uncharacterized LOC112939002	Y/Y
Osa-phasi05g0193	XR_003242294.1	-	365	LOC112939002	Chr5	-	uncharacterized LOC112939002	Y/Y
Osa-phasi06g0291	XR_001546521.2	+	348	LOC9271748	Chr6	-	uncharacterized LOC9271748	Y/Y
Osa-phasi06g0292	XR_001546521.2	+	369	LOC9271748	Chr6	-	uncharacterized LOC9271748	Y/Y