Browse: Expression Capacity

LncRNA Genes Expression Capacity

total numbers: 11005

RiceNCexp estimates the expression capacities of lncRNAs PHAS genes, microRNAs and phasiRNAs based on their expression levels in rice (Oryza sativa). For a certain context, high capacity non-coding RNAs (HCR) are expressed at high expression levels in at least one sample (HEP > 0.0%), and Low capacity non-coding RNAs (LCR) are expressed at low expression levels in all samples (HEP = 0.0% and MEP = 0.0%). The remaining lncRNAs are medium-capacity ncRNAs (MCR) (HEP = 0.0% and MEP > 0.0%)

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.

HCR: High-Capacity ncRNA; MCR: Medium-Capacity ncRNA; LCR: Low-Capacity ncRNA

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Name	NE_num	NEP	LE_num	LEP	ME_num	MEP	HE_num	HEP	Expression Capacity
OSA-LNC107275318	1	0.2%	97	19.72%	129	26.22%	265	53.86%	HCR
OSA-LNC107275343	1	0.2%	489	99.39%	2	0.41%	0	0.0%	MCR
OSA-LNC107275359	1	0.2%	483	98.17%	8	1.63%	0	0.0%	MCR
OSA-LNC107275463	1	0.2%	476	96.75%	15	3.05%	0	0.0%	MCR
OSA-LNC107275610	1	0.2%	444	90.24%	34	6.91%	13	2.64%	HCR
OSA-LNC107275624	1	0.2%	47	9.55%	381	77.44%	63	12.8%	HCR
OSA-LNC107275657	1	0.2%	478	97.15%	11	2.24%	2	0.41%	HCR
OSA-LNC107275663	1	0.2%	286	58.13%	190	38.62%	15	3.05%	HCR
OSA-LNC107275793	1	0.2%	327	66.46%	161	32.72%	3	0.61%	HCR
OSA-LNC107276092	1	0.2%	200	40.65%	256	52.03%	35	7.11%	HCR
OSA-LNC107276180	1	0.2%	335	68.09%	117	23.78%	39	7.93%	HCR
OSA-LNC107276185	1	0.2%	266	54.07%	211	42.89%	14	2.85%	HCR
OSA-LNC107276260	1	0.2%	38	7.72%	16	3.25%	437	88.82%	HCR
OSA-LNC107276331	1	0.2%	487	98.98%	4	0.81%	0	0.0%	MCR
OSA-LNC107276654	1	0.2%	30	6.1%	192	39.02%	269	54.67%	HCR
OSA-LNC107276665	1	0.2%	478	97.15%	13	2.64%	0	0.0%	MCR
OSA-LNC107276716	1	0.2%	173	35.16%	3	0.61%	315	64.02%	HCR
OSA-LNC107276729	1	0.2%	101	20.53%	380	77.24%	10	2.03%	HCR
OSA-LNC107276735	1	0.2%	18	3.66%	212	43.09%	261	53.05%	HCR
OSA-LNC107276740	1	0.2%	241	48.98%	246	50.0%	4	0.81%	HCR
OSA-LNC107276746	1	0.2%	264	53.66%	203	41.26%	24	4.88%	HCR
OSA-LNC107276770	1	0.2%	251	51.02%	141	28.66%	99	20.12%	HCR
OSA-LNC107276798	1	0.2%	388	78.86%	103	20.93%	0	0.0%	MCR
OSA-LNC107276843	1	0.2%	361	73.37%	96	19.51%	34	6.91%	HCR
OSA-LNC107276866	1	0.2%	327	66.46%	119	24.19%	45	9.15%	HCR
OSA-LNC107276879	1	0.2%	451	91.67%	40	8.13%	0	0.0%	MCR
OSA-LNC107276921	1	0.2%	95	19.31%	3	0.61%	393	79.88%	HCR
OSA-LNC107276934	1	0.2%	6	1.22%	117	23.78%	368	74.8%	HCR
OSA-LNC107276936	1	0.2%	225	45.73%	124	25.2%	142	28.86%	HCR
OSA-LNC107276937	1	0.2%	336	68.29%	150	30.49%	5	1.02%	HCR
OSA-LNC107276963	1	0.2%	23	4.67%	265	53.86%	203	41.26%	HCR
OSA-LNC107276964	1	0.2%	14	2.85%	60	12.2%	417	84.76%	HCR
OSA-LNC107276968	1	0.2%	100	20.33%	283	57.52%	108	21.95%	HCR
OSA-LNC107276984	1	0.2%	471	95.73%	19	3.86%	1	0.2%	HCR
OSA-LNC107277086	1	0.2%	43	8.74%	122	24.8%	326	66.26%	HCR
OSA-LNC107277089	1	0.2%	477	96.95%	14	2.85%	0	0.0%	MCR
OSA-LNC107277114	1	0.2%	139	28.25%	248	50.41%	104	21.14%	HCR
OSA-LNC107277140	1	0.2%	455	92.48%	35	7.11%	1	0.2%	HCR
OSA-LNC107277143	1	0.2%	430	87.4%	55	11.18%	6	1.22%	HCR
OSA-LNC107277222	1	0.2%	467	94.92%	12	2.44%	12	2.44%	HCR
OSA-LNC107277223	1	0.2%	479	97.36%	8	1.63%	4	0.81%	HCR
OSA-LNC107277225	1	0.2%	409	83.13%	77	15.65%	5	1.02%	HCR
OSA-LNC107277271	1	0.2%	357	72.56%	93	18.9%	41	8.33%	HCR
OSA-LNC107277283	1	0.2%	403	81.91%	84	17.07%	4	0.81%	HCR
OSA-LNC107277297	1	0.2%	113	22.97%	130	26.42%	248	50.41%	HCR
OSA-LNC107277303	1	0.2%	208	42.28%	259	52.64%	24	4.88%	HCR
OSA-LNC107277328	1	0.2%	304	61.79%	134	27.24%	53	10.77%	HCR
OSA-LNC107277336	1	0.2%	487	98.98%	4	0.81%	0	0.0%	MCR
OSA-LNC107277362	1	0.2%	160	32.52%	276	56.1%	55	11.18%	HCR
OSA-LNC107277372	1	0.2%	42	8.54%	79	16.06%	370	75.2%	HCR
OSA-LNC107277386	1	0.2%	455	92.48%	35	7.11%	1	0.2%	HCR
OSA-LNC107277388	1	0.2%	266	54.07%	102	20.73%	123	25.0%	HCR
OSA-LNC107277396	1	0.2%	344	69.92%	147	29.88%	0	0.0%	MCR
OSA-LNC107277397	1	0.2%	341	69.31%	67	13.62%	83	16.87%	HCR
OSA-LNC107277434	1	0.2%	182	36.99%	267	54.27%	42	8.54%	HCR
OSA-LNC107277448	1	0.2%	315	64.02%	151	30.69%	25	5.08%	HCR
OSA-LNC107277474	1	0.2%	52	10.57%	374	76.02%	65	13.21%	HCR
OSA-LNC107277495	1	0.2%	398	80.89%	80	16.26%	13	2.64%	HCR
OSA-LNC107277532	1	0.2%	16	3.25%	212	43.09%	263	53.46%	HCR
OSA-LNC107277535	1	0.2%	472	95.93%	19	3.86%	0	0.0%	MCR
OSA-LNC107277542	1	0.2%	477	96.95%	8	1.63%	6	1.22%	HCR
OSA-LNC107277578	1	0.2%	387	78.66%	75	15.24%	29	5.89%	HCR
OSA-LNC107277597	1	0.2%	224	45.53%	253	51.42%	14	2.85%	HCR
OSA-LNC107277600	1	0.2%	63	12.8%	41	8.33%	387	78.66%	HCR
OSA-LNC107277608	1	0.2%	449	91.26%	36	7.32%	6	1.22%	HCR
OSA-LNC107277617	1	0.2%	46	9.35%	259	52.64%	186	37.8%	HCR
OSA-LNC107277618	1	0.2%	45	9.15%	90	18.29%	356	72.36%	HCR
OSA-LNC107277630	1	0.2%	278	56.5%	206	41.87%	7	1.42%	HCR
OSA-LNC107277633	1	0.2%	312	63.41%	176	35.77%	3	0.61%	HCR
OSA-LNC107277637	1	0.2%	346	70.33%	141	28.66%	4	0.81%	HCR
OSA-LNC107277646	1	0.2%	23	4.67%	320	65.04%	148	30.08%	HCR
OSA-LNC107277652	1	0.2%	442	89.84%	47	9.55%	2	0.41%	HCR
OSA-LNC107277654	1	0.2%	383	77.85%	92	18.7%	16	3.25%	HCR
OSA-LNC107277674	1	0.2%	282	57.32%	184	37.4%	25	5.08%	HCR
OSA-LNC107277699	1	0.2%	193	39.23%	207	42.07%	91	18.5%	HCR
OSA-LNC107277711	1	0.2%	4	0.81%	37	7.52%	450	91.46%	HCR
OSA-LNC107277715	1	0.2%	227	46.14%	230	46.75%	34	6.91%	HCR
OSA-LNC107277725	1	0.2%	2	0.41%	10	2.03%	479	97.36%	HCR
OSA-LNC107277735	1	0.2%	351	71.34%	135	27.44%	5	1.02%	HCR
OSA-LNC107277736	1	0.2%	54	10.98%	378	76.83%	59	11.99%	HCR
OSA-LNC107277737	1	0.2%	41	8.33%	239	48.58%	211	42.89%	HCR
OSA-LNC107277746	1	0.2%	197	40.04%	65	13.21%	229	46.54%	HCR
OSA-LNC107277755	1	0.2%	52	10.57%	438	89.02%	1	0.2%	HCR
OSA-LNC107277771	1	0.2%	71	14.43%	395	80.28%	25	5.08%	HCR
OSA-LNC107277792	1	0.2%	408	82.93%	83	16.87%	0	0.0%	MCR
OSA-LNC107277793	1	0.2%	432	87.8%	59	11.99%	0	0.0%	MCR
OSA-LNC107277795	1	0.2%	106	21.54%	327	66.46%	58	11.79%	HCR
OSA-LNC107277800	1	0.2%	452	91.87%	33	6.71%	6	1.22%	HCR
OSA-LNC107277803	1	0.2%	0	0.0%	20	4.07%	471	95.73%	HCR
OSA-LNC107277807	1	0.2%	81	16.46%	345	70.12%	65	13.21%	HCR
OSA-LNC107277824	1	0.2%	271	55.08%	210	42.68%	10	2.03%	HCR
OSA-LNC107277828	1	0.2%	320	65.04%	170	34.55%	1	0.2%	HCR
OSA-LNC107277862	1	0.2%	2	0.41%	166	33.74%	323	65.65%	HCR
OSA-LNC107277869	1	0.2%	478	97.15%	10	2.03%	3	0.61%	HCR
OSA-LNC107277875	1	0.2%	19	3.86%	237	48.17%	235	47.76%	HCR
OSA-LNC107277880	1	0.2%	480	97.56%	11	2.24%	0	0.0%	MCR
OSA-LNC107277894	1	0.2%	484	98.37%	7	1.42%	0	0.0%	MCR
OSA-LNC107277900	1	0.2%	314	63.82%	145	29.47%	32	6.5%	HCR
OSA-LNC107277908	1	0.2%	172	34.96%	275	55.89%	44	8.94%	HCR
OSA-LNC107277910	1	0.2%	434	88.21%	57	11.59%	0	0.0%	MCR
OSA-LNC107277942	1	0.2%	120	24.39%	138	28.05%	233	47.36%	HCR
OSA-LNC107277960	1	0.2%	471	95.73%	19	3.86%	1	0.2%	HCR
OSA-LNC107277970	1	0.2%	315	64.02%	176	35.77%	0	0.0%	MCR
OSA-LNC107277984	1	0.2%	43	8.74%	188	38.21%	260	52.85%	HCR
OSA-LNC107277996	1	0.2%	183	37.2%	264	53.66%	44	8.94%	HCR
OSA-LNC107277998	1	0.2%	198	40.24%	289	58.74%	4	0.81%	HCR
OSA-LNC107278008	1	0.2%	179	36.38%	308	62.6%	4	0.81%	HCR
OSA-LNC107278031	1	0.2%	97	19.72%	350	71.14%	44	8.94%	HCR
OSA-LNC107278037	1	0.2%	324	65.85%	165	33.54%	2	0.41%	HCR
OSA-LNC107278045	1	0.2%	21	4.27%	165	33.54%	305	61.99%	HCR
OSA-LNC107278057	1	0.2%	127	25.81%	124	25.2%	240	48.78%	HCR
OSA-LNC107278058	1	0.2%	12	2.44%	387	78.66%	92	18.7%	HCR
OSA-LNC107278063	1	0.2%	312	63.41%	177	35.98%	2	0.41%	HCR
OSA-LNC107278074	1	0.2%	126	25.61%	291	59.15%	74	15.04%	HCR
OSA-LNC107278075	1	0.2%	101	20.53%	254	51.63%	136	27.64%	HCR
OSA-LNC107278077	1	0.2%	68	13.82%	277	56.3%	146	29.67%	HCR
OSA-LNC107278082	1	0.2%	25	5.08%	38	7.72%	428	86.99%	HCR
OSA-LNC107278087	1	0.2%	378	76.83%	113	22.97%	0	0.0%	MCR
OSA-LNC107278096	1	0.2%	361	73.37%	105	21.34%	25	5.08%	HCR
OSA-LNC107278097	1	0.2%	231	46.95%	233	47.36%	27	5.49%	HCR
OSA-LNC107278108	1	0.2%	49	9.96%	423	85.98%	19	3.86%	HCR
OSA-LNC107278111	1	0.2%	446	90.65%	45	9.15%	0	0.0%	MCR
OSA-LNC107278116	1	0.2%	290	58.94%	200	40.65%	1	0.2%	HCR
OSA-LNC107278119	1	0.2%	158	32.11%	65	13.21%	268	54.47%	HCR
OSA-LNC107278126	1	0.2%	117	23.78%	366	74.39%	8	1.63%	HCR
OSA-LNC107278133	1	0.2%	393	79.88%	63	12.8%	35	7.11%	HCR
OSA-LNC107278136	1	0.2%	1	0.2%	21	4.27%	469	95.33%	HCR
OSA-LNC107278140	1	0.2%	243	49.39%	193	39.23%	55	11.18%	HCR
OSA-LNC107278151	1	0.2%	73	14.84%	405	82.32%	13	2.64%	HCR
OSA-LNC107278165	1	0.2%	305	61.99%	51	10.37%	135	27.44%	HCR
OSA-LNC107278171	1	0.2%	322	65.45%	166	33.74%	3	0.61%	HCR
OSA-LNC107278183	1	0.2%	342	69.51%	148	30.08%	1	0.2%	HCR
OSA-LNC107278186	1	0.2%	253	51.42%	138	28.05%	100	20.33%	HCR
OSA-LNC107278187	1	0.2%	451	91.67%	40	8.13%	0	0.0%	MCR
OSA-LNC107278204	1	0.2%	67	13.62%	365	74.19%	59	11.99%	HCR
OSA-LNC107278223	1	0.2%	209	42.48%	277	56.3%	5	1.02%	HCR
OSA-LNC107278234	1	0.2%	283	57.52%	207	42.07%	1	0.2%	HCR
OSA-LNC107278268	1	0.2%	346	70.33%	38	7.72%	107	21.75%	HCR
OSA-LNC107278280	1	0.2%	433	88.01%	53	10.77%	5	1.02%	HCR
OSA-LNC107278285	1	0.2%	396	80.49%	94	19.11%	1	0.2%	HCR
OSA-LNC107278303	1	0.2%	144	29.27%	277	56.3%	70	14.23%	HCR
OSA-LNC107278305	1	0.2%	117	23.78%	312	63.41%	62	12.6%	HCR
OSA-LNC107278307	1	0.2%	71	14.43%	223	45.33%	197	40.04%	HCR
OSA-LNC107278310	1	0.2%	139	28.25%	136	27.64%	216	43.9%	HCR
OSA-LNC107278315	1	0.2%	6	1.22%	9	1.83%	476	96.75%	HCR
OSA-LNC107278319	1	0.2%	62	12.6%	371	75.41%	58	11.79%	HCR
OSA-LNC107278328	1	0.2%	194	39.43%	153	31.1%	144	29.27%	HCR
OSA-LNC107278331	1	0.2%	113	22.97%	378	76.83%	0	0.0%	MCR
OSA-LNC107278333	1	0.2%	400	81.3%	87	17.68%	4	0.81%	HCR
OSA-LNC107278335	1	0.2%	3	0.61%	73	14.84%	415	84.35%	HCR
OSA-LNC107278340	1	0.2%	327	66.46%	140	28.46%	24	4.88%	HCR
OSA-LNC107278354	1	0.2%	363	73.78%	128	26.02%	0	0.0%	MCR
OSA-LNC107278356	1	0.2%	125	25.41%	299	60.77%	67	13.62%	HCR
OSA-LNC107278360	1	0.2%	413	83.94%	52	10.57%	26	5.28%	HCR
OSA-LNC107278362	1	0.2%	2	0.41%	163	33.13%	326	66.26%	HCR
OSA-LNC107278366	1	0.2%	23	4.67%	102	20.73%	366	74.39%	HCR
OSA-LNC107278367	1	0.2%	223	45.33%	258	52.44%	10	2.03%	HCR
OSA-LNC107278378	1	0.2%	180	36.59%	306	62.2%	5	1.02%	HCR
OSA-LNC107278386	1	0.2%	109	22.15%	166	33.74%	216	43.9%	HCR
OSA-LNC107278387	1	0.2%	381	77.44%	5	1.02%	105	21.34%	HCR
OSA-LNC107278390	1	0.2%	169	34.35%	315	64.02%	7	1.42%	HCR
OSA-LNC107278402	1	0.2%	138	28.05%	197	40.04%	156	31.71%	HCR
OSA-LNC107278406	1	0.2%	325	66.06%	114	23.17%	52	10.57%	HCR
OSA-LNC107278408	1	0.2%	371	75.41%	30	6.1%	90	18.29%	HCR
OSA-LNC107278416	1	0.2%	1	0.2%	43	8.74%	447	90.85%	HCR
OSA-LNC107278424	1	0.2%	85	17.28%	355	72.15%	51	10.37%	HCR
OSA-LNC107278443	1	0.2%	383	77.85%	105	21.34%	3	0.61%	HCR
OSA-LNC107278448	1	0.2%	375	76.22%	66	13.41%	50	10.16%	HCR
OSA-LNC107278452	1	0.2%	379	77.03%	108	21.95%	4	0.81%	HCR
OSA-LNC107278467	1	0.2%	441	89.63%	49	9.96%	1	0.2%	HCR
OSA-LNC107278468	1	0.2%	208	42.28%	253	51.42%	30	6.1%	HCR
OSA-LNC107278469	1	0.2%	352	71.54%	139	28.25%	0	0.0%	MCR
OSA-LNC107278477	1	0.2%	32	6.5%	279	56.71%	180	36.59%	HCR
OSA-LNC107278478	1	0.2%	158	32.11%	329	66.87%	4	0.81%	HCR
OSA-LNC107278479	1	0.2%	91	18.5%	287	58.33%	113	22.97%	HCR
OSA-LNC107278480	1	0.2%	146	29.67%	327	66.46%	18	3.66%	HCR
OSA-LNC107278483	1	0.2%	384	78.05%	35	7.11%	72	14.63%	HCR
OSA-LNC107278489	1	0.2%	442	89.84%	31	6.3%	18	3.66%	HCR
OSA-LNC107278495	1	0.2%	80	16.26%	192	39.02%	219	44.51%	HCR
OSA-LNC107278503	1	0.2%	471	95.73%	20	4.07%	0	0.0%	MCR
OSA-LNC107278504	1	0.2%	50	10.16%	234	47.56%	207	42.07%	HCR
OSA-LNC107278507	1	0.2%	106	21.54%	384	78.05%	1	0.2%	HCR
OSA-LNC107278508	1	0.2%	436	88.62%	55	11.18%	0	0.0%	MCR
OSA-LNC107278513	1	0.2%	223	45.33%	239	48.58%	29	5.89%	HCR
OSA-LNC107278519	1	0.2%	6	1.22%	457	92.89%	28	5.69%	HCR
OSA-LNC107278522	1	0.2%	191	38.82%	291	59.15%	9	1.83%	HCR
OSA-LNC107278525	1	0.2%	35	7.11%	183	37.2%	273	55.49%	HCR
OSA-LNC107278526	1	0.2%	250	50.81%	166	33.74%	75	15.24%	HCR
OSA-LNC107278527	1	0.2%	317	64.43%	162	32.93%	12	2.44%	HCR
OSA-LNC107278530	1	0.2%	110	22.36%	327	66.46%	54	10.98%	HCR
OSA-LNC107278532	1	0.2%	350	71.14%	141	28.66%	0	0.0%	MCR
OSA-LNC107278534	1	0.2%	480	97.56%	11	2.24%	0	0.0%	MCR
OSA-LNC107278535	1	0.2%	101	20.53%	326	66.26%	64	13.01%	HCR
OSA-LNC107278536	1	0.2%	331	67.28%	158	32.11%	2	0.41%	HCR
OSA-LNC107278539	1	0.2%	97	19.72%	180	36.59%	214	43.5%	HCR
OSA-LNC107278719	1	0.2%	2	0.41%	44	8.94%	445	90.45%	HCR
OSA-LNC107278738	1	0.2%	10	2.03%	164	33.33%	317	64.43%	HCR
OSA-LNC107278783	1	0.2%	215	43.7%	241	48.98%	35	7.11%	HCR
OSA-LNC107278784	1	0.2%	18	3.66%	399	81.1%	74	15.04%	HCR
OSA-LNC107278787	1	0.2%	427	86.79%	21	4.27%	43	8.74%	HCR