| SRR4457249 | 2nd_leaf | DAH4 | 6.28 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 4.98 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 4.35 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 8.73 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 9.66 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 6.65 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 11.34 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 9.06 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 9.18 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 11.63 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 10.44 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 10.73 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 9.28 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 9.42 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 7.62 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 8.02 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 8.83 | HC |
| SRR6320473 | carpel | wt | 13.88 | HC |
| SRR6320498 | carpel | wt | 13.74 | HC |
| SRR5560727 | caryopsis | wild_type | 12.76 | HC |
| SRR5560728 | caryopsis | wild_type | 15.02 | HC |
| SRR5560729 | caryopsis | wild_type | 16.75 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 15.39 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 11.21 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 5.33 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 4.67 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 11.58 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 5.89 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 5.53 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 5.67 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 4.00 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 4.26 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.39 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 4.82 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 3.56 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.12 | HC |
| SRR7265373 | embryo | dry seed 0 h | 8.46 | HC |
| SRR7265374 | embryo | dry seed 0 h | 7.79 | HC |
| SRR7265375 | embryo | dry seed 0 h | 3.25 | HC |
| SRR7265376 | embryo | 1hA | 5.36 | HC |
| SRR7265377 | embryo | 1hA | 5.65 | HC |
| SRR7265378 | embryo | 1hA | 6.63 | HC |
| SRR7265379 | embryo | 1hN | 7.93 | HC |
| SRR7265380 | embryo | 1hN | 4.60 | HC |
| SRR7265381 | embryo | 1hN | 7.09 | HC |
| SRR7265385 | embryo | 3hN | 5.07 | HC |
| SRR7265386 | embryo | 3hN | 3.81 | HC |
| SRR7265387 | embryo | 3hN | 4.95 | HC |
| SRR4457231 | flag_leaf | DAH4 | 4.56 | HC |
| SRR4457232 | flag_leaf | DAH4 | 4.25 | HC |
| SRR4457233 | flag_leaf | DAH4 | 5.59 | HC |
| SRR4457234 | flag_leaf | DAH12 | 5.76 | HC |
| SRR4457235 | flag_leaf | DAH12 | 3.55 | HC |
| SRR4457236 | flag_leaf | DAH12 | 3.57 | HC |
| SRR4457237 | flag_leaf | DAH20 | 3.63 | HC |
| SRR4457238 | flag_leaf | DAH20 | 4.78 | HC |
| SRR4457242 | flag_leaf | DAH28 | 5.68 | HC |
| SRR4457243 | flag_leaf | DAH36 | 9.93 | HC |
| SRR4457244 | flag_leaf | DAH36 | 7.44 | HC |
| SRR4457245 | flag_leaf | DAH36 | 6.64 | HC |
| SRR4457246 | flag_leaf | DAH44 | 6.49 | HC |
| SRR4457247 | flag_leaf | DAH44 | 7.06 | HC |
| SRR4457248 | flag_leaf | DAH44 | 7.39 | HC |
| SRR1213690 | flower | wt(flower buds) | 7.50 | HC |
| SRR1213691 | flower | wt | 8.63 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 4.82 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 7.96 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 6.34 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 8.04 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 20.67 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 11.04 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 12.94 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 11.52 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 9.76 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 9.27 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 18.75 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 12.80 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 10.15 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 19.70 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 13.35 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 15.84 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.94 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 12.89 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.96 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 16.29 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 12.43 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 12.72 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 14.44 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 11.91 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.40 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 22.53 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 13.15 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 10.33 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 31.34 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 15.84 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 10.54 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 17.83 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 18.55 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 11.33 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 16.34 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 10.12 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 11.40 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 13.60 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 16.03 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 15.05 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 15.08 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 16.14 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 6.75 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 7.04 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 15.08 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 16.14 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 6.75 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 7.04 | HC |
| SRR1761528 | leaf | drought | 15.08 | HC |
| SRR1761529 | leaf | drought | 16.14 | HC |
| SRR1761530 | leaf | control | 6.75 | HC |
| SRR1761531 | leaf | control | 7.04 | HC |
| SRR504365 | leaf | wt | 15.38 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 14.22 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 12.45 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 14.81 | HC |
| SRR6417967 | leaf | H2O_control | 9.45 | HC |
| SRR6417968 | leaf | H2O_control | 13.63 | HC |
| SRR6417969 | leaf | H2O_control | 11.48 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 21.86 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 19.05 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 3.90 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.69 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 16.48 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 14.89 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 18.19 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 3.66 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 18.83 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.00 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.08 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 10.69 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 6.56 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 9.28 | HC |
| SRR6502088 | leaf | control | 7.14 | HC |
| SRR6502089 | leaf | control | 7.48 | HC |
| SRR6502090 | leaf | control | 7.19 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 17.97 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 15.78 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 7.31 | HC |
| SRR6502100 | leaf | control | 9.22 | HC |
| SRR6502101 | leaf | control | 7.84 | HC |
| SRR6502102 | leaf | control | 10.30 | HC |
| SRR5856930 | leaf | salt | 4.35 | HC |
| SRR5856931 | leaf | salt | 3.95 | HC |
| SRR5856932 | leaf | salt | 4.74 | HC |
| SRR5856936 | leaf | salt | 5.26 | HC |
| SRR5856937 | leaf | salt | 5.68 | HC |
| SRR5856938 | leaf | salt | 5.29 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 10.96 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 18.00 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 9.40 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 9.95 | HC |
| SRR6168973 | leaf | none (control) | 8.96 | HC |
| SRR6168974 | leaf | none (control) | 6.53 | HC |
| SRR6168975 | leaf | none (control) | 5.54 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 14.74 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 4.61 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 14.64 | HC |
| SRR6168979 | leaf | none (control) | 5.47 | HC |
| SRR6168980 | leaf | none (control) | 2.81 | HC |
| SRR6168981 | leaf | none (control) | 3.77 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 4.12 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 4.77 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 6.13 | HC |
| SRR8582888 | panicle | AM | 3.84 | HC |
| SRR8582889 | panicle | AM | 2.13 | HC |
| SRR8582892 | panicle | PM | 11.22 | HC |
| SRR8582893 | panicle | PM | 5.74 | HC |
| SRR5110429 | panicle | Dawn | 10.03 | HC |
| SRR5110430 | panicle | Dawn | 12.07 | HC |
| SRR5110431 | panicle | Dawn | 12.74 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 4.44 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 5.27 | HC |
| SRR5110439 | panicle | Dawn + 7h | 9.59 | HC |
| SRR5110449 | panicle | Dawn + 14h | 8.50 | HC |
| SRR5110450 | panicle | Dawn + 14h | 6.12 | HC |
| SRR5110451 | panicle | Dawn + 14h | 5.07 | HC |
| SRR5110452 | panicle | Dawn + 14h | 6.17 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 4.57 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 4.45 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 5.47 | HC |
| SRR5110458 | panicle | Dawn + 21h | 6.15 | HC |
| SRR5110459 | panicle | Dawn + 21h | 6.58 | HC |
| SRR5110460 | panicle | Dawn + 21h | 9.83 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.67 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 6.70 | HC |
| SRR1633182 | panicle | WT | 24.99 | HC |
| SRR1633185 | panicle | WT | 56.58 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 4.22 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 7.85 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 7.97 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 28.93 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 28.05 | HC |
| SRR5126147 | root | "mock,1_day" | 4.80 | HC |
| SRR5126153 | root | "mock,7_days" | 6.06 | HC |
| SRR5126155 | root | "mock,7_days" | 6.68 | HC |
| SRR5126157 | root | "mock,7_days" | 9.96 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 5.76 | HC |
| SRR5126165 | root | "mock,14_days" | 5.41 | HC |
| SRR5126167 | root | "mock,14_days" | 3.98 | HC |
| SRR5126169 | root | "mock,14_days" | 6.96 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 7.46 | HC |
| SRR1213695 | root | wt | 6.30 | HC |
| SRR4947497 | root | control | 6.17 | HC |
| SRR6502091 | root | 100 mM NaCl | 8.65 | HC |
| SRR6502092 | root | 100 mM NaCl | 10.19 | HC |
| SRR6502093 | root | 100 mM NaCl | 13.18 | HC |
| SRR6502103 | root | 100 mM NaCl | 10.17 | HC |
| SRR6502104 | root | 100 mM NaCl | 11.54 | HC |
| SRR6502105 | root | 100 mM NaCl | 9.07 | HC |
| SRR6502108 | root | control | 5.10 | HC |
| SRR2154086 | seedling | wt | 5.48 | HC |
| SRR2154082 | seedling | wt | 4.39 | HC |
| SRR2154084 | seedling | wt | 5.85 | HC |
| SRR2154087 | seedling | wt | 7.47 | HC |
| SRR3098741 | seedling | wt | 2.83 | HC |
| SRR3098742 | seedling | wt | 4.06 | HC |
| SRR3098743 | seedling | wt | 3.65 | HC |
| SRR2857719 | seedling | drought_stress_0h | 11.84 | HC |
| SRR2857720 | seedling | drought_stress_1h | 12.81 | HC |
| SRR2857721 | seedling | drought_stress_6h | 21.80 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 4.64 | HC |
| SRR1944583 | seedling | no_treatment | 6.83 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.22 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 5.24 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 5.55 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.28 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 5.10 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.78 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 8.98 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 9.53 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 18.45 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 18.18 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.95 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.52 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.50 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.89 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.59 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 8.07 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 10.31 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 14.07 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 13.16 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 12.92 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 8.30 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 9.39 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 5.10 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 3.86 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.70 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 9.65 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 10.37 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 10.94 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 10.90 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 12.90 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 12.26 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 3.33 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 2.60 | HC |