| SRR4457264 | 2nd_leaf | DAH44 | 4.21 | MC |
| SRR3745125 | anther | wt | 2.15 | MC |
| SRR3745126 | anther | wt | 2.32 | MC |
| SRR3745127 | anther | wt | 2.46 | MC |
| SRR358795 | callus | wt | 2.49 | MC |
| SRR358796 | callus | wt | 2.56 | MC |
| SRR358797 | callus | wt | 2.54 | MC |
| SRR358798 | callus | wt | 3.12 | MC |
| SRR4947495 | root | control | 1.73 | MC |
| SRR7265400 | coleoptile | 2dA | 0.81 | MC |
| SRR7265401 | coleoptile | 2dA | 0.67 | MC |
| SRR7265402 | coleoptile | 2dA | 0.32 | MC |
| SRR7265403 | coleoptile | 2dN | 0.47 | MC |
| SRR7265404 | coleoptile | 2dN | 0.44 | MC |
| SRR7265407 | coleoptile | 3dA | 0.29 | MC |
| SRR7265408 | coleoptile | 3dA | 0.39 | MC |
| SRR7265411 | coleoptile | 3dN | 0.32 | MC |
| SRR7265413 | coleoptile | 4dA | 0.85 | MC |
| SRR7265414 | coleoptile | 4dA | 0.69 | MC |
| SRR7265417 | coleoptile | 4dN | 0.72 | MC |
| SRR7265418 | coleoptile | 3dN1dA | 0.48 | MC |
| SRR7265419 | coleoptile | 3dN1dA | 0.87 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 3.73 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 3.65 | MC |
| SRR7265382 | embryo | 3hA | 2.78 | MC |
| SRR7265383 | embryo | 3hA | 3.38 | MC |
| SRR7265384 | embryo | 3hA | 2.24 | MC |
| SRR7265388 | embryo | 12hA | 0.79 | MC |
| SRR7265389 | embryo | 12hA | 0.57 | MC |
| SRR7265390 | embryo | 12hA | 0.61 | MC |
| SRR7265391 | embryo | 12hN | 0.65 | MC |
| SRR7265393 | embryo | 12hN | 0.66 | MC |
| SRR2338867 | endosprem | control | 0.72 | MC |
| SRR2338868 | endosprem | high_temperature | 1.94 | MC |
| SRR2338869 | endosprem | high_temperature | 1.45 | MC |
| SRR976168 | flag_leaf | wild_type | 0.46 | MC |
| SRR4457239 | flag_leaf | DAH20 | 3.10 | MC |
| SRR4457240 | flag_leaf | DAH28 | 4.34 | MC |
| SRR4457241 | flag_leaf | DAH28 | 3.05 | MC |
| SRR8060835 | leaf | wild_type | 2.64 | MC |
| SRR8060836 | leaf | wild_type | 1.21 | MC |
| SRR8060837 | leaf | wild_type | 1.86 | MC |
| SRR8240824 | leaf | wild_type | 1.09 | MC |
| SRR8240825 | leaf | wild_type | 0.72 | MC |
| SRR8240826 | leaf | wild_type | 1.95 | MC |
| SRR8240819 | leaf | wild_type | 0.51 | MC |
| SRR8240820 | leaf | wild_type | 0.24 | MC |
| SRR3209769 | leaf | Watered;Long_Day | 1.96 | MC |
| SRR3209770 | leaf | Watered;Long_Day | 1.83 | MC |
| SRR3209777 | leaf | Watered;Long_Day | 1.25 | MC |
| SRR8611900 | leaf | Non-inoculated | 2.67 | MC |
| SRR8611901 | leaf | Non-inoculated | 2.98 | MC |
| SRR8611902 | leaf | Non-inoculated | 3.52 | MC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 1.55 | MC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 1.22 | MC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 0.91 | MC |
| SRR1213692 | leaf | wt | 4.14 | MC |
| SRR1213693 | leaf | wt | 2.69 | MC |
| SRR5856927 | leaf | control | 0.58 | MC |
| SRR5856928 | leaf | control | 0.55 | MC |
| SRR5856929 | leaf | control | 0.66 | MC |
| SRR5856933 | leaf | control | 0.74 | MC |
| SRR5856934 | leaf | control | 1.80 | MC |
| SRR5856935 | leaf | control | 1.76 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 3.72 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 3.30 | MC |
| SRR6053397 | leaf | gibberellic acid (GA) | 4.17 | MC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 6.01 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 5.37 | MC |
| SRR8582890 | panicle | AM | 1.68 | MC |
| SRR8582891 | panicle | PM | 5.33 | MC |
| SRR5110432 | panicle | Dawn | 3.78 | MC |
| SRR4947496 | root | control | 2.11 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 3.49 | MC |
| SRR5110434 | panicle | Dawn + 3.5h | 3.82 | MC |
| SRR5110437 | panicle | Dawn + 7h | 2.01 | MC |
| SRR5110438 | panicle | Dawn + 7h | 1.94 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.19 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 2.59 | MC |
| SRR5110442 | panicle | Dawn + 10.5h | 2.07 | MC |
| SRR5110443 | panicle | Dawn + 10.5h | 2.27 | MC |
| SRR5110444 | panicle | Dawn + 10.5h | 3.60 | MC |
| SRR5110445 | panicle | Dusk | 3.87 | MC |
| SRR5110446 | panicle | Dusk | 4.16 | MC |
| SRR5110447 | panicle | Dusk | 2.76 | MC |
| SRR5110448 | panicle | Dusk | 4.13 | MC |
| SRR5110454 | panicle | Dawn + 17.5h | 3.66 | MC |
| SRR5110457 | panicle | Dawn + 21h | 1.55 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 3.04 | MC |
| SRR5126148 | root | "mock,1_day" | 3.19 | MC |
| SRR5126149 | root | "mock,1_day" | 3.96 | MC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 2.89 | MC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 2.42 | MC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 2.46 | MC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 4.40 | MC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 5.24 | MC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 4.29 | MC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 3.91 | MC |
| SRR3472897 | root | nontransgenic_rice_plant | 0.43 | MC |
| SRR3472900 | root | nontransgenic_rice_plant | 1.10 | MC |
| SRR1213694 | root | wt | 0.68 | MC |
| SRR4947478 | root | control | 0.76 | MC |
| SRR4947479 | root | control | 1.81 | MC |
| SRR4947480 | root | control | 4.19 | MC |
| SRR4947481 | root | control | 4.83 | MC |
| SRR4947482 | root | Al | 2.00 | MC |
| SRR4947483 | root | Al | 1.00 | MC |
| SRR4947484 | root | Al | 3.09 | MC |
| SRR4947485 | root | Al | 4.93 | MC |
| SRR4947487 | root | control | 2.18 | MC |
| SRR4947488 | root | control | 3.02 | MC |
| SRR4947489 | root | control | 2.98 | MC |
| SRR4947490 | root | Al | 2.15 | MC |
| SRR4947491 | root | Al | 3.47 | MC |
| SRR4947492 | root | Al | 2.74 | MC |
| SRR4947493 | root | Al | 2.88 | MC |
| SRR4947494 | root | control | 2.93 | MC |
| SRR4947498 | root | Al | 3.51 | MC |
| SRR4947499 | root | Al | 1.61 | MC |
| SRR4947500 | root | Al | 2.10 | MC |
| SRR4947501 | root | Al | 5.64 | MC |
| SRR4947502 | root | control | 4.01 | MC |
| SRR4947503 | root | control | 2.23 | MC |
| SRR4947504 | root | control | 2.88 | MC |
| SRR4947505 | root | control | 2.27 | MC |
| SRR4947506 | root | Al | 2.29 | MC |
| SRR4947507 | root | Al | 2.99 | MC |
| SRR4947508 | root | Al | 2.54 | MC |
| SRR4947509 | root | Al | 2.40 | MC |
| SRR6502094 | root | control | 3.44 | MC |
| SRR6502095 | root | control | 3.22 | MC |
| SRR6502096 | root | control | 2.12 | MC |
| SRR6502106 | root | control | 2.00 | MC |
| SRR6502107 | root | control | 3.45 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.81 | MC |
| SRR1740435 | root_differentiation_zone | wt | 0.96 | MC |
| SRR1740436 | root_differentiation_zone | wt | 1.23 | MC |
| SRR1740431 | root_elongation_zone | wt | 1.41 | MC |
| SRR1740432 | root_elongation_zone | wt | 1.94 | MC |
| SRR1740433 | root_elongation_zone | wt | 2.07 | MC |
| SRR1740428 | root_meristematic_zone | wt | 1.93 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.56 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.88 | MC |
| SRR6441554 | seedling | wild_type | 0.86 | MC |
| SRR6441555 | seedling | wild_type | 1.58 | MC |
| SRR2154083 | seedling | wt | 3.50 | MC |
| SRR2154085 | seedling | wt | 3.81 | MC |
| SRR358791 | seedling | wt | 7.70 | MC |
| SRR358792 | seedling | wt | 4.87 | MC |
| SRR358793 | seedling | wt | 2.37 | MC |
| SRR358794 | seedling | wt | 1.60 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.65 | MC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 2.47 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 3.76 | MC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 13.44 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 7.37 | MC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.74 | MC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.53 | MC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 1.71 | MC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 3.42 | MC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 1.98 | MC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 2.50 | MC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 2.62 | MC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 1.98 | MC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 3.19 | MC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 1.68 | MC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 3.22 | MC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 1.87 | MC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 2.26 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 1.49 | MC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 3.03 | MC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 2.63 | MC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.15 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.63 | MC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 7.84 | MC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 7.57 | MC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 6.62 | MC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 6.16 | MC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 7.91 | MC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 4.97 | MC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 6.89 | MC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 5.37 | MC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 6.49 | MC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 6.49 | MC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 6.32 | MC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 7.69 | MC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 5.74 | MC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 5.24 | MC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 6.08 | MC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 5.27 | MC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 7.12 | MC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 7.05 | MC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 7.52 | MC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 3.74 | MC |
| SRR1617549 | shoot_apical_meristem | no collect | 5.83 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 7.00 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 3.44 | MC |
| SRR1617554 | shoot_apical_meristem | no collect | 4.17 | MC |
| SRR1617556 | shoot_apical_meristem | no collect | 3.89 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 3.30 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 5.59 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 6.18 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 3.02 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 2.74 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 3.10 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 2.31 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 3.19 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 3.29 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 1.17 | MC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.11 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 2.06 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 2.48 | MC |