| SRR4457265 | 2nd_leaf | DAH44 | 2.93 | MC |
| SRR6320473 | carpel | wt | 4.99 | MC |
| SRR6320498 | carpel | wt | 2.13 | MC |
| SRR5560727 | caryopsis | wild_type | 1.89 | MC |
| SRR5560728 | caryopsis | wild_type | 3.37 | MC |
| SRR5560729 | caryopsis | wild_type | 3.49 | MC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 2.93 | MC |
| SRR7265403 | coleoptile | 2dN | 2.90 | MC |
| SRR7265409 | coleoptile | 3dN | 1.93 | MC |
| SRR7265410 | coleoptile | 3dN | 1.30 | MC |
| SRR7265411 | coleoptile | 3dN | 1.18 | MC |
| SRR7265415 | coleoptile | 4dN | 3.35 | MC |
| SRR7265416 | coleoptile | 4dN | 1.77 | MC |
| SRR7265417 | coleoptile | 4dN | 2.20 | MC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 1.70 | MC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 2.23 | MC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 1.99 | MC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 1.38 | MC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 1.11 | MC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 0.59 | MC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 1.66 | MC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 1.19 | MC |
| SRR7265388 | embryo | 12hA | 1.10 | MC |
| SRR7265389 | embryo | 12hA | 0.71 | MC |
| SRR7265390 | embryo | 12hA | 1.07 | MC |
| SRR7265399 | embryo | 24hN | 0.59 | MC |
| SRR2338866 | endosprem | control | 1.51 | MC |
| SRR1213690 | flower | wt(flower buds) | 3.29 | MC |
| SRR1213691 | flower | wt | 1.05 | MC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 1.19 | MC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.68 | MC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 0.86 | MC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 1.24 | MC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 0.63 | MC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 1.84 | MC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 0.90 | MC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.08 | MC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 0.98 | MC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 1.74 | MC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 1.10 | MC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 1.35 | MC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.31 | MC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 2.39 | MC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 0.99 | MC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 1.51 | MC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.87 | MC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 3.84 | MC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 1.46 | MC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.95 | MC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 1.91 | MC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 2.02 | MC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 1.42 | MC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 2.32 | MC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 3.73 | MC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.39 | MC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.48 | MC |
| SRR6417968 | leaf | H2O_control | 2.00 | MC |
| SRR3209771 | leaf | Drought;Long_Day | 2.41 | MC |
| SRR3209780 | leaf | Drought;Short_Day | 4.47 | MC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 6.26 | MC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 3.20 | MC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 1.84 | MC |
| SRR6053395 | leaf | gibberellic acid (GA) | 8.95 | MC |
| SRR6053396 | leaf | gibberellic acid (GA) | 5.34 | MC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 6.09 | MC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 4.71 | MC |
| SRR6168973 | leaf | none (control) | 0.59 | MC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 0.37 | MC |
| SRR6168979 | leaf | none (control) | 0.20 | MC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 0.32 | MC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 0.36 | MC |
| SRR8582889 | panicle | AM | 0.16 | MC |
| SRR8582890 | panicle | AM | 1.59 | MC |
| SRR8582891 | panicle | PM | 1.24 | MC |
| SRR8582892 | panicle | PM | 2.46 | MC |
| SRR8582893 | panicle | PM | 3.26 | MC |
| SRR5110430 | panicle | Dawn | 4.86 | MC |
| SRR5110431 | panicle | Dawn | 2.03 | MC |
| SRR5110433 | panicle | Dawn + 3.5h | 4.39 | MC |
| SRR5110435 | panicle | Dawn + 3.5h | 2.75 | MC |
| SRR5110436 | panicle | Dawn + 3.5h | 4.29 | MC |
| SRR5110439 | panicle | Dawn + 7h | 2.92 | MC |
| SRR5110440 | panicle | Dawn + 7h | 3.18 | MC |
| SRR5110441 | panicle | Dawn + 10.5h | 3.36 | MC |
| SRR5110449 | panicle | Dawn + 14h | 4.14 | MC |
| SRR5278374 | pistil | "Balilla,S1" | 0.37 | MC |
| SRR5278375 | pistil | "Balilla,S1" | 0.26 | MC |
| SRR5278378 | pistil | "Balilla,S3" | 0.51 | MC |
| SRR5278379 | pistil | "Balilla,S3" | 0.99 | MC |
| SRR5126148 | root | "mock,1_day" | 2.36 | MC |
| SRR1740434 | root_differentiation_zone | wt | 0.61 | MC |
| SRR1740436 | root_differentiation_zone | wt | 0.28 | MC |
| SRR1740432 | root_elongation_zone | wt | 0.61 | MC |
| SRR1740429 | root_meristematic_zone | wt | 0.85 | MC |
| SRR1740430 | root_meristematic_zone | wt | 0.19 | MC |
| SRR6441554 | seedling | wild_type | 1.13 | MC |
| SRR2857721 | seedling | drought_stress_6h | 1.96 | MC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 2.29 | MC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 4.20 | MC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 6.05 | MC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 6.27 | MC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 5.93 | MC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 3.09 | MC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.10 | MC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.49 | MC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 2.10 | MC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 1.83 | MC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 1.66 | MC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.57 | MC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 1.50 | MC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.83 | MC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 0.75 | MC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 0.81 | MC |
| SRR1617550 | shoot_apical_meristem | no collect | 7.93 | MC |
| SRR1617553 | shoot_apical_meristem | no collect | 6.95 | MC |
| SRR1617557 | shoot_apical_meristem | no collect | 5.29 | MC |
| SRR1617558 | shoot_apical_meristem | no collect | 2.71 | MC |
| SRR1617559 | shoot_apical_meristem | no collect | 3.26 | MC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 2.01 | MC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 1.76 | MC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 1.67 | MC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 1.28 | MC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 0.58 | MC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 0.70 | MC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 3.50 | MC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 0.78 | MC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 0.45 | MC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 0.39 | MC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 0.58 | MC |