| SRR4457249 | 2nd_leaf | DAH4 | 6.04 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 5.48 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 7.03 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 3.83 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 6.28 | HC |
| SRR3745126 | anther | wt | 8.82 | HC |
| SRR3745127 | anther | wt | 8.05 | HC |
| SRR5560727 | caryopsis | wild_type | 12.39 | HC |
| SRR5560728 | caryopsis | wild_type | 11.57 | HC |
| SRR5560729 | caryopsis | wild_type | 12.51 | HC |
| SRR4947495 | root | control | 13.50 | HC |
| SRR7265400 | coleoptile | 2dA | 3.89 | HC |
| SRR7265401 | coleoptile | 2dA | 4.44 | HC |
| SRR7265402 | coleoptile | 2dA | 4.24 | HC |
| SRR7265403 | coleoptile | 2dN | 6.65 | HC |
| SRR7265404 | coleoptile | 2dN | 5.45 | HC |
| SRR7265405 | coleoptile | 2dN | 5.77 | HC |
| SRR7265410 | coleoptile | 3dN | 4.12 | HC |
| SRR7265411 | coleoptile | 3dN | 3.83 | HC |
| SRR7265415 | coleoptile | 4dN | 5.86 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 7.91 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 4.70 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 6.50 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 12.77 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 9.01 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 9.56 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 8.82 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 6.72 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 8.04 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 6.27 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 7.95 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 8.02 | HC |
| SRR7265388 | embryo | 12hA | 7.20 | HC |
| SRR7265389 | embryo | 12hA | 6.59 | HC |
| SRR7265390 | embryo | 12hA | 7.13 | HC |
| SRR7265391 | embryo | 12hN | 8.20 | HC |
| SRR7265392 | embryo | 12hN | 7.70 | HC |
| SRR7265393 | embryo | 12hN | 8.19 | HC |
| SRR7265394 | embryo | 24hA | 6.43 | HC |
| SRR7265395 | embryo | 24hA | 6.42 | HC |
| SRR7265396 | embryo | 24hA | 6.30 | HC |
| SRR7265397 | embryo | 24hN | 9.74 | HC |
| SRR7265398 | embryo | 24hN | 7.76 | HC |
| SRR7265399 | embryo | 24hN | 8.70 | HC |
| SRR2338866 | endosprem | control | 5.07 | HC |
| SRR2338867 | endosprem | control | 3.36 | HC |
| SRR2338869 | endosprem | high_temperature | 4.36 | HC |
| SRR976168 | flag_leaf | wild_type | 3.78 | HC |
| SRR4457232 | flag_leaf | DAH4 | 3.48 | HC |
| SRR4457233 | flag_leaf | DAH4 | 3.38 | HC |
| SRR4457238 | flag_leaf | DAH20 | 4.30 | HC |
| SRR4457243 | flag_leaf | DAH36 | 4.57 | HC |
| SRR1213690 | flower | wt(flower buds) | 8.78 | HC |
| SRR1213691 | flower | wt | 8.11 | HC |
| SRR8060835 | leaf | wild_type | 3.59 | HC |
| SRR8060836 | leaf | wild_type | 3.96 | HC |
| SRR8060837 | leaf | wild_type | 3.57 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.54 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.39 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.14 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 7.64 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.75 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.65 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.32 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 10.67 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 9.67 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.66 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.41 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.02 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 5.74 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 4.80 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.87 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.30 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.09 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.00 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.01 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 9.66 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 6.64 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.71 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.67 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.20 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 9.17 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.39 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.19 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 9.39 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 6.92 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 9.04 | HC |
| SRR504365 | leaf | wt | 6.97 | HC |
| SRR6417969 | leaf | H2O_control | 5.39 | HC |
| SRR8611900 | leaf | Non-inoculated | 7.63 | HC |
| SRR8611901 | leaf | Non-inoculated | 7.23 | HC |
| SRR8611902 | leaf | Non-inoculated | 7.51 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 7.86 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 6.80 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 6.22 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.31 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.61 | HC |
| SRR5856927 | leaf | control | 4.23 | HC |
| SRR5856928 | leaf | control | 3.97 | HC |
| SRR5856929 | leaf | control | 4.96 | HC |
| SRR5856930 | leaf | salt | 2.61 | HC |
| SRR5856931 | leaf | salt | 2.17 | HC |
| SRR5856932 | leaf | salt | 2.38 | HC |
| SRR5856933 | leaf | control | 4.88 | HC |
| SRR5856934 | leaf | control | 2.93 | HC |
| SRR5856935 | leaf | control | 3.54 | HC |
| SRR5856936 | leaf | salt | 2.33 | HC |
| SRR5856937 | leaf | salt | 2.35 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 9.35 | HC |
| SRR6168973 | leaf | none (control) | 17.44 | HC |
| SRR6168974 | leaf | none (control) | 20.14 | HC |
| SRR6168975 | leaf | none (control) | 18.95 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 23.80 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 3.43 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 18.03 | HC |
| SRR6168981 | leaf | none (control) | 4.20 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 2.92 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 3.38 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 3.81 | HC |
| SRR8582893 | panicle | PM | 6.15 | HC |
| SRR5110429 | panicle | Dawn | 10.19 | HC |
| SRR5110430 | panicle | Dawn | 10.75 | HC |
| SRR5110431 | panicle | Dawn | 9.97 | HC |
| SRR5110432 | panicle | Dawn | 6.80 | HC |
| SRR4947496 | root | control | 10.03 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 7.08 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 6.86 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 6.84 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 8.32 | HC |
| SRR5110437 | panicle | Dawn + 7h | 11.22 | HC |
| SRR5110438 | panicle | Dawn + 7h | 11.50 | HC |
| SRR5110439 | panicle | Dawn + 7h | 10.15 | HC |
| SRR5110440 | panicle | Dawn + 7h | 8.91 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 8.15 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 10.69 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 9.77 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 7.79 | HC |
| SRR5110445 | panicle | Dusk | 10.10 | HC |
| SRR5110446 | panicle | Dusk | 14.25 | HC |
| SRR5110447 | panicle | Dusk | 10.65 | HC |
| SRR5110448 | panicle | Dusk | 13.22 | HC |
| SRR5110449 | panicle | Dawn + 14h | 13.29 | HC |
| SRR5110450 | panicle | Dawn + 14h | 7.28 | HC |
| SRR5110451 | panicle | Dawn + 14h | 10.48 | HC |
| SRR5110452 | panicle | Dawn + 14h | 10.53 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 9.33 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 7.33 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 8.94 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 9.19 | HC |
| SRR5110457 | panicle | Dawn + 21h | 8.43 | HC |
| SRR5110458 | panicle | Dawn + 21h | 5.61 | HC |
| SRR5110459 | panicle | Dawn + 21h | 5.81 | HC |
| SRR5110460 | panicle | Dawn + 21h | 7.25 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.81 | HC |
| SRR1633182 | panicle | WT | 5.65 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 4.99 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 10.13 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 10.10 | HC |
| SRR5126147 | root | "mock,1_day" | 4.98 | HC |
| SRR5126148 | root | "mock,1_day" | 4.68 | HC |
| SRR5126149 | root | "mock,1_day" | 6.03 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 5.15 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 5.55 | HC |
| SRR5126153 | root | "mock,7_days" | 5.22 | HC |
| SRR5126155 | root | "mock,7_days" | 4.61 | HC |
| SRR5126157 | root | "mock,7_days" | 8.09 | HC |
| SRR5126165 | root | "mock,14_days" | 5.91 | HC |
| SRR5126169 | root | "mock,14_days" | 7.12 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.22 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 6.16 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 6.77 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.11 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 4.40 | HC |
| SRR1213694 | root | wt | 3.37 | HC |
| SRR1213695 | root | wt | 3.30 | HC |
| SRR4947478 | root | control | 7.55 | HC |
| SRR4947479 | root | control | 16.16 | HC |
| SRR4947480 | root | control | 14.09 | HC |
| SRR4947481 | root | control | 19.41 | HC |
| SRR4947483 | root | Al | 9.60 | HC |
| SRR4947484 | root | Al | 8.28 | HC |
| SRR4947485 | root | Al | 10.76 | HC |
| SRR4947487 | root | control | 10.08 | HC |
| SRR4947488 | root | control | 9.31 | HC |
| SRR4947489 | root | control | 9.15 | HC |
| SRR4947490 | root | Al | 10.24 | HC |
| SRR4947491 | root | Al | 13.69 | HC |
| SRR4947492 | root | Al | 12.86 | HC |
| SRR4947493 | root | Al | 11.26 | HC |
| SRR4947494 | root | control | 11.39 | HC |
| SRR4947497 | root | control | 14.92 | HC |
| SRR4947498 | root | Al | 11.99 | HC |
| SRR4947499 | root | Al | 15.11 | HC |
| SRR4947500 | root | Al | 10.72 | HC |
| SRR4947501 | root | Al | 16.40 | HC |
| SRR4947502 | root | control | 13.21 | HC |
| SRR4947503 | root | control | 11.79 | HC |
| SRR4947504 | root | control | 16.49 | HC |
| SRR4947505 | root | control | 14.49 | HC |
| SRR4947506 | root | Al | 7.90 | HC |
| SRR4947507 | root | Al | 12.41 | HC |
| SRR4947508 | root | Al | 7.16 | HC |
| SRR4947509 | root | Al | 12.64 | HC |
| SRR1740436 | root_differentiation_zone | wt | 5.29 | HC |
| SRR1740432 | root_elongation_zone | wt | 6.23 | HC |
| SRR1740433 | root_elongation_zone | wt | 4.72 | HC |
| SRR1740429 | root_meristematic_zone | wt | 8.79 | HC |
| SRR1740430 | root_meristematic_zone | wt | 8.94 | HC |
| SRR6441554 | seedling | wild_type | 3.76 | HC |
| SRR6441555 | seedling | wild_type | 3.32 | HC |
| SRR2154086 | seedling | wt | 8.97 | HC |
| SRR2154083 | seedling | wt | 5.67 | HC |
| SRR2154085 | seedling | wt | 7.71 | HC |
| SRR2154087 | seedling | wt | 7.66 | HC |
| SRR3098741 | seedling | wt | 6.01 | HC |
| SRR3098742 | seedling | wt | 7.27 | HC |
| SRR3098743 | seedling | wt | 6.26 | HC |
| SRR2857719 | seedling | drought_stress_0h | 5.06 | HC |
| SRR2857720 | seedling | drought_stress_1h | 5.35 | HC |
| SRR1944583 | seedling | no_treatment | 4.68 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 4.02 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 4.39 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 3.56 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 3.62 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.09 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.99 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.71 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.10 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.26 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.75 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 6.23 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.83 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.32 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 5.49 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 6.60 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 9.59 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 9.20 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 9.01 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 13.31 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 10.23 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 8.65 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 8.95 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 8.34 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 10.54 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 8.55 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 8.69 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 10.58 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 8.72 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 10.45 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 10.67 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 15.45 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 9.98 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 7.77 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 8.62 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 7.47 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 6.16 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 6.53 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 6.17 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 6.37 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 7.54 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 7.27 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 7.17 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 5.88 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 6.86 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 6.67 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 5.92 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 8.17 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 6.49 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 7.02 | HC |