RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 2413

rows per page

Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0003	XM_015766964.2	+	550	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0006	XM_015766964.2	+	571	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0009	XM_015766964.2	+	592	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0012	XM_015766964.2	+	613	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0015	XM_015766964.2	-	632	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0016	XM_015766964.2	-	653	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0018	XM_015766964.2	+	655	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0021	XM_015766964.2	+	676	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0024	XM_015766964.2	-	695	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0025	XM_015766964.2	+	697	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0028	XM_015766964.2	+	718	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0031	XM_015766964.2	-	737	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0033	XM_015766964.2	+	739	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0036	XM_015766964.2	-	758	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0038	XM_015766964.2	+	760	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0041	XM_015766964.2	+	781	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0042	XM_015766964.2	+	793	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0043	XM_015766964.2	-	800	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0044	XM_015766964.2	+	802	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0047	XM_015766964.2	-	863	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0048	XM_015766964.2	-	884	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0049	XM_015766964.2	-	905	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0050	XM_015766964.2	+	907	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0051	XM_015766964.2	+	928	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0072	XM_015766966.2	+	545	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0075	XM_015766966.2	+	566	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0078	XM_015766966.2	+	587	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0081	XM_015766966.2	+	608	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0084	XM_015766966.2	-	627	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0085	XM_015766966.2	-	648	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0087	XM_015766966.2	+	650	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0090	XM_015766966.2	+	671	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0093	XM_015766966.2	-	690	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0094	XM_015766966.2	+	692	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0097	XM_015766966.2	+	713	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0100	XM_015766966.2	-	732	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0102	XM_015766966.2	+	734	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0105	XM_015766966.2	-	753	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0107	XM_015766966.2	+	755	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0110	XM_015766966.2	+	776	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0111	XM_015766966.2	+	788	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0112	XM_015766966.2	-	795	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0113	XM_015766966.2	+	797	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0116	XM_015766966.2	-	858	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0117	XM_015766966.2	-	879	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0118	XM_015766966.2	-	900	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0119	XM_015766966.2	+	902	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0120	XM_015766966.2	+	923	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0147	XM_015766967.2	-	1600	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0148	XM_015766967.2	+	1602	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0150	XM_015766967.2	-	1621	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0153	XM_015766967.2	+	1644	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0154	XM_015766967.2	+	1656	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0155	XM_015766967.2	-	1663	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0159	XM_015766967.2	-	1726	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0160	XM_015766967.2	-	1747	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0161	XM_015766967.2	-	1768	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0162	XM_015766967.2	+	1770	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0163	XM_015766967.2	+	1791	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0192	XR_003240320.1	-	1382	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0193	XR_003240320.1	-	1403	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0195	XR_003240320.1	-	1424	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0196	XR_003240320.1	+	1426	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0197	XR_003240320.1	-	1445	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0199	XR_003240320.1	-	1466	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0200	XR_003240320.1	+	1468	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0201	XR_003240320.1	-	1487	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0203	XR_003240320.1	-	1508	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0204	XR_003240320.1	+	1510	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0206	XR_003240320.1	-	1550	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0207	XR_003240320.1	-	1571	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0208	XR_003240320.1	+	1594	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0210	XR_003240320.1	-	1634	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0213	XR_003240318.1	+	293	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0215	XR_003240318.1	-	333	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0218	XR_003240318.1	-	375	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0222	XR_003240318.1	+	461	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0223	XR_003240318.1	+	482	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0227	XR_003240318.1	-	564	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0228	XR_003240318.1	+	566	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0231	XR_003240318.1	-	648	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0237	XR_003240318.1	+	1579	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0240	XR_003240318.1	+	1600	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0242	XR_003240318.1	+	1621	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0245	XR_003240318.1	-	1661	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0246	XR_003240318.1	+	1663	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0247	XR_003240318.1	+	1684	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0254	XR_003240318.1	+	1768	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0364	XR_001547319.2	+	531	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/Y
Osa-phasi01g0367	XR_001547319.2	-	571	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/Y
Osa-phasi01g0370	XR_001547319.2	-	613	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/Y
Osa-phasi01g0372	XR_001547319.2	+	636	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/Y
Osa-phasi01g0374	XM_015780228.2	+	256	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0376	XM_015780228.2	+	277	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0378	XM_015780228.2	+	319	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0381	XM_015780228.2	+	340	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0383	XM_015780228.2	-	359	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0385	XM_015780228.2	+	382	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0387	XM_015780228.2	+	403	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0389	XM_015780228.2	+	424	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y