RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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total numbers: 9239

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Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0101	XM_015766966.2	-	733	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0102	XM_015766966.2	+	734	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0103	XM_015766966.2	+	735	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0104	XM_015766966.2	+	746	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0105	XM_015766966.2	-	753	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0106	XM_015766966.2	-	754	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0107	XM_015766966.2	+	755	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0108	XM_015766966.2	+	756	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0109	XM_015766966.2	-	774	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0110	XM_015766966.2	+	776	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0111	XM_015766966.2	+	788	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0112	XM_015766966.2	-	795	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0113	XM_015766966.2	+	797	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0114	XM_015766966.2	+	818	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0115	XM_015766966.2	-	837	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	Y/Y
Osa-phasi01g0116	XM_015766966.2	-	858	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0117	XM_015766966.2	-	879	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0118	XM_015766966.2	-	900	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0119	XM_015766966.2	+	902	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0120	XM_015766966.2	+	923	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0121	XM_015766966.2	-	942	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0122	XM_015766966.2	+	944	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0123	XM_015766966.2	-	963	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0124	XM_015766966.2	+	965	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0125	XM_015766966.2	+	986	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0126	XM_015766966.2	-	1068	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0127	XM_015766966.2	-	1089	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0128	XM_015766966.2	+	1091	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0129	XM_015766966.2	-	1110	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0130	XM_015766966.2	-	1131	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0131	XM_015766966.2	+	1133	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0132	XM_015766966.2	-	1152	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0133	XM_015766966.2	-	1173	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0134	XM_015766966.2	-	1194	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0135	XM_015766966.2	-	1215	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0136	XM_015766966.2	-	1236	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0137	XM_015766966.2	-	1278	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0138	XM_015766966.2	+	1301	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0139	XM_015766967.2	+	1530	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0140	XM_015766967.2	+	1539	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0141	XM_015766967.2	+	1551	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0142	XM_015766967.2	-	1558	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0143	XM_015766967.2	+	1560	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0144	XM_015766967.2	-	1579	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0145	XM_015766967.2	+	1581	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0146	XM_015766967.2	-	1591	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0147	XM_015766967.2	-	1600	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0148	XM_015766967.2	+	1602	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0149	XM_015766967.2	+	1614	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0150	XM_015766967.2	-	1621	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0151	XM_015766967.2	+	1623	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0152	XM_015766967.2	-	1642	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0153	XM_015766967.2	+	1644	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0154	XM_015766967.2	+	1656	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0155	XM_015766967.2	-	1663	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0156	XM_015766967.2	+	1665	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0157	XM_015766967.2	+	1686	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0158	XM_015766967.2	-	1705	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	Y/Y
Osa-phasi01g0159	XM_015766967.2	-	1726	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0160	XM_015766967.2	-	1747	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0161	XM_015766967.2	-	1768	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0162	XM_015766967.2	+	1770	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0163	XM_015766967.2	+	1791	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/Y
Osa-phasi01g0164	XM_015766967.2	-	1810	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0165	XM_015766967.2	+	1812	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0166	XM_015766967.2	-	1831	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0167	XM_015766967.2	+	1833	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0168	XM_015766967.2	+	1854	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0169	XM_015766967.2	-	1936	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0170	XM_015766967.2	-	1957	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0171	XM_015766967.2	+	1959	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0172	XM_015766967.2	-	1978	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0173	XM_015766967.2	-	1999	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0174	XM_015766967.2	+	2001	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0175	XM_015766967.2	-	2020	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0176	XM_015766967.2	-	2041	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0177	XM_015766967.2	-	2062	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0178	XM_015766967.2	-	2083	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0179	XM_015766967.2	-	2104	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0180	XM_015766967.2	-	2146	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0181	XM_015766967.2	+	2169	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0182	XM_015766258.2	+	1104	LOC9269164	Chr1	+	uncharacterized LOC9269164	N/N
Osa-phasi01g0183	XM_015766258.2	+	1107	LOC9269164	Chr1	+	uncharacterized LOC9269164	N/N
Osa-phasi01g0184	XM_015766258.2	+	1146	LOC9269164	Chr1	+	uncharacterized LOC9269164	N/N
Osa-phasi01g0185	XM_015766258.2	+	1149	LOC9269164	Chr1	+	uncharacterized LOC9269164	N/N
Osa-phasi01g0186	XM_015766258.2	-	1165	LOC9269164	Chr1	+	uncharacterized LOC9269164	N/N
Osa-phasi01g0187	XM_015766258.2	-	1168	LOC9269164	Chr1	+	uncharacterized LOC9269164	N/N
Osa-phasi01g0188	XM_015766258.2	+	1251	LOC9269164	Chr1	+	uncharacterized LOC9269164	N/N
Osa-phasi01g0189	XM_015766258.2	+	1272	LOC9269164	Chr1	+	uncharacterized LOC9269164	N/N
Osa-phasi01g0190	XM_015766258.2	+	1317	LOC9269164	Chr1	+	uncharacterized LOC9269164	N/N
Osa-phasi01g0191	XR_003240320.1	+	1342	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/N
Osa-phasi01g0192	XR_003240320.1	-	1382	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0193	XR_003240320.1	-	1403	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0194	XR_003240320.1	+	1405	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/N
Osa-phasi01g0195	XR_003240320.1	-	1424	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0196	XR_003240320.1	+	1426	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0197	XR_003240320.1	-	1445	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0198	XR_003240320.1	+	1447	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/N
Osa-phasi01g0199	XR_003240320.1	-	1466	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0200	XR_003240320.1	+	1468	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y