RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 9239

rows per page

Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0001	XM_015766964.2	+	529	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0002	XM_015766964.2	-	548	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0003	XM_015766964.2	+	550	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0004	XM_015766964.2	+	551	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0005	XM_015766964.2	-	569	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0006	XM_015766964.2	+	571	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0007	XM_015766964.2	+	572	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0008	XM_015766964.2	-	590	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0009	XM_015766964.2	+	592	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0010	XM_015766964.2	-	611	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0011	XM_015766964.2	-	612	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0012	XM_015766964.2	+	613	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0013	XM_015766964.2	+	614	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0014	XM_015766964.2	-	623	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0015	XM_015766964.2	-	632	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0016	XM_015766964.2	-	653	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0017	XM_015766964.2	-	654	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0018	XM_015766964.2	+	655	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0019	XM_015766964.2	+	667	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0020	XM_015766964.2	-	674	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0021	XM_015766964.2	+	676	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0022	XM_015766964.2	+	677	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0023	XM_015766964.2	+	688	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0024	XM_015766964.2	-	695	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0025	XM_015766964.2	+	697	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0026	XM_015766964.2	-	716	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0027	XM_015766964.2	-	717	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0028	XM_015766964.2	+	718	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0029	XM_015766964.2	+	719	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0030	XM_015766964.2	-	728	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0031	XM_015766964.2	-	737	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0032	XM_015766964.2	-	738	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0033	XM_015766964.2	+	739	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0034	XM_015766964.2	+	740	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0035	XM_015766964.2	+	751	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0036	XM_015766964.2	-	758	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0037	XM_015766964.2	-	759	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0038	XM_015766964.2	+	760	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0039	XM_015766964.2	+	761	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0040	XM_015766964.2	-	779	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0041	XM_015766964.2	+	781	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0042	XM_015766964.2	+	793	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0043	XM_015766964.2	-	800	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0044	XM_015766964.2	+	802	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0045	XM_015766964.2	+	823	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0046	XM_015766964.2	-	842	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	Y/Y
Osa-phasi01g0047	XM_015766964.2	-	863	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0048	XM_015766964.2	-	884	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0049	XM_015766964.2	-	905	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0050	XM_015766964.2	+	907	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0051	XM_015766964.2	+	928	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/Y
Osa-phasi01g0052	XM_015766964.2	-	947	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0053	XM_015766964.2	+	949	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0054	XM_015766964.2	-	968	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0055	XM_015766964.2	+	970	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0056	XM_015766964.2	+	991	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0057	XM_015766964.2	-	1073	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0058	XM_015766964.2	-	1094	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0059	XM_015766964.2	+	1096	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0060	XM_015766964.2	-	1115	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0061	XM_015766964.2	-	1136	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0062	XM_015766964.2	+	1138	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0063	XM_015766964.2	-	1157	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0064	XM_015766964.2	-	1178	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0065	XM_015766964.2	-	1199	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0066	XM_015766964.2	-	1220	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0067	XM_015766964.2	-	1241	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0068	XM_015766964.2	-	1283	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0069	XM_015766964.2	+	1306	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0070	XM_015766966.2	+	524	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0071	XM_015766966.2	-	543	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0072	XM_015766966.2	+	545	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0073	XM_015766966.2	+	546	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0074	XM_015766966.2	-	564	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0075	XM_015766966.2	+	566	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0076	XM_015766966.2	+	567	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0077	XM_015766966.2	-	585	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0078	XM_015766966.2	+	587	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0079	XM_015766966.2	-	606	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0080	XM_015766966.2	-	607	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0081	XM_015766966.2	+	608	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0082	XM_015766966.2	+	609	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0083	XM_015766966.2	-	618	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0084	XM_015766966.2	-	627	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0085	XM_015766966.2	-	648	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0086	XM_015766966.2	-	649	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0087	XM_015766966.2	+	650	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0088	XM_015766966.2	+	662	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0089	XM_015766966.2	-	669	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0090	XM_015766966.2	+	671	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0091	XM_015766966.2	+	672	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0092	XM_015766966.2	+	683	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0093	XM_015766966.2	-	690	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0094	XM_015766966.2	+	692	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0095	XM_015766966.2	-	711	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0096	XM_015766966.2	-	712	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0097	XM_015766966.2	+	713	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y
Osa-phasi01g0098	XM_015766966.2	+	714	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0099	XM_015766966.2	-	723	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0100	XM_015766966.2	-	732	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/Y