Source:
XR_001547319.2
Strand on PHAS Transcript:
-
Start on PHAS Transcript:
613
Sequence:
AACAUUGGAAAUGGGAAAGGA
Length:
21
PHAS Gene Name:
LOC4326727
Chr:
Chr1
PHAS Transcript Annotation:
uncharacterized LOC4326727
PHAS Transcript Sequence:
GCUGAUCUGAAACGGUGACAAUCCAAGUGCACAAAAAACCUUCACCUACCGAGCUGCUUUCCACCAACCCUCCUCACAACACCCUUCCCCUUCCUCGAUCUUGAAUUUACCCAAUGCAGUCCUAGUGCUGCUGGUUGCUUUUGCAUCCUCUUCUACUGCAGUUGGUCUUGUUUCAGCUUCGUGGAAGCUAAUGGAGGACAAAGAUGAUAGAUUUUGCUACAACGGCAACAAAUAUCGAAAAGGCAAAGACGCAGUUGCCGUCAUGUUUGAGGCGAUCUGGUUUGAUGAUGAAGUAGCAUUCGACUUUCCCAUGGGCAUCUGUGCAACCAAAGCGUCACAUCAUGCUAGCAUUUGGAAGCCUUCCUAGUUCAUGAAUGGUGCUAUCCCGAUUGAGCUUUUUUUUAUCUGUCAUACUAUCCCUAUCUUCAGGUAAUCAAAUGCUAGACGUUCUUGAGUGCUAGAACAUUUUGUUCCGAGUACUUUGGAACGUUCUUGACCUUGCAAGGCUUCUCCCUGACCUUGCAAGAGUUGUCAAUUUCUACCAUCUCCUUGCCACACUUCUUGGCCCUUGUAUUCUCGCCAUCCCAAACCUUCCUUUCCCAUUUCCAAUGUUAACAUUGGAAAUGGGAAAGGACAUCCAUUUCUUCCUUCUAUCCCUCCUGAGCUAGCUUUUCUCCCAUGUUCUGCCAAAAAAAAAUGUUGUUGACAAGGUUAGAGUCAUGGAGAGCAGUACUACAUGUGUGAUUCUCAAGGGUCUUGUAUAUCAGAAGACUUUGCUAAUAGAAGAAGCUGAAAUAUUUAAUGUAUGUAUUUUAUAAGUUGUAAGAUUGCUAGUCACUUGAUUGAGCUAAAUAUUCCAUUGCUAUAUAUGGUUCACUCACCCUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
243
NEP:
88.69%
LE_num:
LEP:
3.28%
ME_num:
MEP:
7.66%
HE_num:
HEP:
0.36%
Type:
HCR (High-Capacity ncRNA)
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.93
Avg Expression:
11.70
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
| Num. | Condition | log2(FoldChange) | Padj |
|---|---|---|---|
| Tip: Osa-phasi01g0370 is not a differential expression ncRNA. | |||