RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 9239

rows per page

Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0351	XM_015766155.2	-	3489	LOC4325878	Chr1	+	protein EMBRYONIC FLOWER 1	N/N
Osa-phasi01g0352	XM_015766155.2	+	3534	LOC4325878	Chr1	+	protein EMBRYONIC FLOWER 1	N/N
Osa-phasi01g0353	XR_001543580.2	+	437	LOC107280151	Chr1	+	uncharacterized LOC107280151	N/N
Osa-phasi01g0354	XR_001543580.2	+	626	LOC107280151	Chr1	+	uncharacterized LOC107280151	N/N
Osa-phasi01g0355	XR_001543580.2	-	645	LOC107280151	Chr1	+	uncharacterized LOC107280151	N/N
Osa-phasi01g0356	XR_001543580.2	+	647	LOC107280151	Chr1	+	uncharacterized LOC107280151	N/N
Osa-phasi01g0357	XR_001547319.2	-	424	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/N
Osa-phasi01g0358	XR_001547319.2	+	426	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/N
Osa-phasi01g0359	XR_001547319.2	-	445	LOC4326727	Chr1	-	uncharacterized LOC4326727	Y/N
Osa-phasi01g0360	XR_001547319.2	+	447	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/N
Osa-phasi01g0361	XR_001547319.2	-	487	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/N
Osa-phasi01g0362	XR_001547319.2	+	489	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/N
Osa-phasi01g0363	XR_001547319.2	+	510	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/N
Osa-phasi01g0364	XR_001547319.2	+	531	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/Y
Osa-phasi01g0365	XR_001547319.2	-	550	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/N
Osa-phasi01g0366	XR_001547319.2	+	552	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/N
Osa-phasi01g0367	XR_001547319.2	-	571	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/Y
Osa-phasi01g0368	XR_001547319.2	+	573	LOC4326727	Chr1	-	uncharacterized LOC4326727	Y/N
Osa-phasi01g0369	XR_001547319.2	-	592	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/N
Osa-phasi01g0370	XR_001547319.2	-	613	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/Y
Osa-phasi01g0371	XR_001547319.2	-	634	LOC4326727	Chr1	-	uncharacterized LOC4326727	Y/Y
Osa-phasi01g0372	XR_001547319.2	+	636	LOC4326727	Chr1	-	uncharacterized LOC4326727	N/Y
Osa-phasi01g0373	XR_001547319.2	-	655	LOC4326727	Chr1	-	uncharacterized LOC4326727	Y/N
Osa-phasi01g0374	XM_015780228.2	+	256	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0375	XM_015780228.2	-	275	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0376	XM_015780228.2	+	277	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0377	XM_015780228.2	+	285	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0378	XM_015780228.2	+	319	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0379	XM_015780228.2	+	327	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0380	XM_015780228.2	-	338	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0381	XM_015780228.2	+	340	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0382	XM_015780228.2	-	346	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0383	XM_015780228.2	-	359	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0384	XM_015780228.2	-	380	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0385	XM_015780228.2	+	382	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0386	XM_015780228.2	-	401	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0387	XM_015780228.2	+	403	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0388	XM_015780228.2	-	422	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0389	XM_015780228.2	+	424	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0390	XM_015780228.2	+	432	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0391	XM_015780228.2	-	443	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0392	XM_015780228.2	+	445	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0393	XM_015780228.2	-	464	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0394	XM_015780228.2	+	466	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0395	XM_015780228.2	-	485	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0396	XM_015780228.2	+	487	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0397	XM_015780228.2	-	506	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0398	XM_015780228.2	+	508	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0399	XM_015780228.2	-	527	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/N
Osa-phasi01g0400	XM_015780228.2	+	529	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y