Source:
XR_001547319.2
Strand on PHAS Transcript:
+
Start on PHAS Transcript:
573
Sequence:
UUCUCGCCAUCCCAAACCUUC
Length:
21
PHAS Gene Name:
LOC4326727
Chr:
Chr1
PHAS Transcript Annotation:
uncharacterized LOC4326727
PHAS Transcript Sequence:
GCUGAUCUGAAACGGUGACAAUCCAAGUGCACAAAAAACCUUCACCUACCGAGCUGCUUUCCACCAACCCUCCUCACAACACCCUUCCCCUUCCUCGAUCUUGAAUUUACCCAAUGCAGUCCUAGUGCUGCUGGUUGCUUUUGCAUCCUCUUCUACUGCAGUUGGUCUUGUUUCAGCUUCGUGGAAGCUAAUGGAGGACAAAGAUGAUAGAUUUUGCUACAACGGCAACAAAUAUCGAAAAGGCAAAGACGCAGUUGCCGUCAUGUUUGAGGCGAUCUGGUUUGAUGAUGAAGUAGCAUUCGACUUUCCCAUGGGCAUCUGUGCAACCAAAGCGUCACAUCAUGCUAGCAUUUGGAAGCCUUCCUAGUUCAUGAAUGGUGCUAUCCCGAUUGAGCUUUUUUUUAUCUGUCAUACUAUCCCUAUCUUCAGGUAAUCAAAUGCUAGACGUUCUUGAGUGCUAGAACAUUUUGUUCCGAGUACUUUGGAACGUUCUUGACCUUGCAAGGCUUCUCCCUGACCUUGCAAGAGUUGUCAAUUUCUACCAUCUCCUUGCCACACUUCUUGGCCCUUGUAUUCUCGCCAUCCCAAACCUUCCUUUCCCAUUUCCAAUGUUCAGCUGCAUCCUCCACGCUCACAUCCAUUUCUUCCUUCUAUCCCUCCUGAGCUAGCUUUUCUCCCAUGUUCUGCCAAAAAAAAAUGUUGUUGACAAGGUUAGAGUCAUGGAGAGCAGUACUACAUGUGUGAUUCUCAAGGGUCUUGUAUAUCAGAAGACUUUGCUAAUAGAAGAAGCUGAAAUAUUUAAUGUAUGUAUUUUAUAAGUUGUAAGAUUGCUAGUCACUUGAUUGAGCUAAAUAUUCCAUUGCUAUAUAUGGUUCACUCACCCUA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
255
NEP:
93.07%
LE_num:
LEP:
2.55%
ME_num:
MEP:
4.38%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
leaf_sheath
Tau :
0.97
Avg Expression:
5.96
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | Nipponbare // leaf_sheath // S_bph feeding--/--Nipponbare // leaf_sheath // S_bph feeding_late | -8.17719948774791 | 0.000138385300357361 |