RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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total numbers: 6575

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Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0001	XM_015766964.2	+	529	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0002	XM_015766964.2	-	548	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0004	XM_015766964.2	+	551	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0005	XM_015766964.2	-	569	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0007	XM_015766964.2	+	572	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0008	XM_015766964.2	-	590	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0010	XM_015766964.2	-	611	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0011	XM_015766964.2	-	612	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0013	XM_015766964.2	+	614	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0014	XM_015766964.2	-	623	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0017	XM_015766964.2	-	654	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0019	XM_015766964.2	+	667	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0020	XM_015766964.2	-	674	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0022	XM_015766964.2	+	677	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0023	XM_015766964.2	+	688	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0026	XM_015766964.2	-	716	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0027	XM_015766964.2	-	717	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0029	XM_015766964.2	+	719	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0030	XM_015766964.2	-	728	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0032	XM_015766964.2	-	738	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0034	XM_015766964.2	+	740	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0035	XM_015766964.2	+	751	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0037	XM_015766964.2	-	759	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0039	XM_015766964.2	+	761	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0040	XM_015766964.2	-	779	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0045	XM_015766964.2	+	823	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0052	XM_015766964.2	-	947	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0053	XM_015766964.2	+	949	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0054	XM_015766964.2	-	968	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0055	XM_015766964.2	+	970	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0056	XM_015766964.2	+	991	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0057	XM_015766964.2	-	1073	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0058	XM_015766964.2	-	1094	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0059	XM_015766964.2	+	1096	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0060	XM_015766964.2	-	1115	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0061	XM_015766964.2	-	1136	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0062	XM_015766964.2	+	1138	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0063	XM_015766964.2	-	1157	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0064	XM_015766964.2	-	1178	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0065	XM_015766964.2	-	1199	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0066	XM_015766964.2	-	1220	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0067	XM_015766964.2	-	1241	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0068	XM_015766964.2	-	1283	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0069	XM_015766964.2	+	1306	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0070	XM_015766966.2	+	524	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0071	XM_015766966.2	-	543	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0073	XM_015766966.2	+	546	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0074	XM_015766966.2	-	564	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0076	XM_015766966.2	+	567	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0077	XM_015766966.2	-	585	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0079	XM_015766966.2	-	606	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0080	XM_015766966.2	-	607	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0082	XM_015766966.2	+	609	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0083	XM_015766966.2	-	618	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0086	XM_015766966.2	-	649	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0088	XM_015766966.2	+	662	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0089	XM_015766966.2	-	669	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0091	XM_015766966.2	+	672	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0092	XM_015766966.2	+	683	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0095	XM_015766966.2	-	711	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0096	XM_015766966.2	-	712	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0098	XM_015766966.2	+	714	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0099	XM_015766966.2	-	723	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0101	XM_015766966.2	-	733	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0103	XM_015766966.2	+	735	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0104	XM_015766966.2	+	746	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0106	XM_015766966.2	-	754	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0108	XM_015766966.2	+	756	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0109	XM_015766966.2	-	774	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0114	XM_015766966.2	+	818	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0121	XM_015766966.2	-	942	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0122	XM_015766966.2	+	944	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0123	XM_015766966.2	-	963	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0124	XM_015766966.2	+	965	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0125	XM_015766966.2	+	986	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0126	XM_015766966.2	-	1068	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0127	XM_015766966.2	-	1089	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0128	XM_015766966.2	+	1091	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0129	XM_015766966.2	-	1110	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0130	XM_015766966.2	-	1131	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0131	XM_015766966.2	+	1133	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0132	XM_015766966.2	-	1152	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0133	XM_015766966.2	-	1173	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0134	XM_015766966.2	-	1194	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0135	XM_015766966.2	-	1215	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0136	XM_015766966.2	-	1236	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0137	XM_015766966.2	-	1278	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0138	XM_015766966.2	+	1301	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0139	XM_015766967.2	+	1530	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0140	XM_015766967.2	+	1539	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0141	XM_015766967.2	+	1551	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0142	XM_015766967.2	-	1558	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0143	XM_015766967.2	+	1560	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0144	XM_015766967.2	-	1579	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0145	XM_015766967.2	+	1581	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0146	XM_015766967.2	-	1591	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0149	XM_015766967.2	+	1614	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0151	XM_015766967.2	+	1623	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0152	XM_015766967.2	-	1642	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N
Osa-phasi01g0156	XM_015766967.2	+	1665	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X3	N/N