RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 6575

rows per page

Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0001	XM_015766964.2	+	529	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0002	XM_015766964.2	-	548	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0004	XM_015766964.2	+	551	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0005	XM_015766964.2	-	569	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0007	XM_015766964.2	+	572	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0008	XM_015766964.2	-	590	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0010	XM_015766964.2	-	611	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0011	XM_015766964.2	-	612	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0013	XM_015766964.2	+	614	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0014	XM_015766964.2	-	623	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0017	XM_015766964.2	-	654	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0019	XM_015766964.2	+	667	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0020	XM_015766964.2	-	674	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0022	XM_015766964.2	+	677	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0023	XM_015766964.2	+	688	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0026	XM_015766964.2	-	716	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0027	XM_015766964.2	-	717	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0029	XM_015766964.2	+	719	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0030	XM_015766964.2	-	728	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0032	XM_015766964.2	-	738	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0034	XM_015766964.2	+	740	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0035	XM_015766964.2	+	751	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0037	XM_015766964.2	-	759	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0039	XM_015766964.2	+	761	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0040	XM_015766964.2	-	779	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0045	XM_015766964.2	+	823	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0052	XM_015766964.2	-	947	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0053	XM_015766964.2	+	949	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0054	XM_015766964.2	-	968	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0055	XM_015766964.2	+	970	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0056	XM_015766964.2	+	991	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0057	XM_015766964.2	-	1073	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0058	XM_015766964.2	-	1094	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0059	XM_015766964.2	+	1096	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0060	XM_015766964.2	-	1115	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0061	XM_015766964.2	-	1136	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0062	XM_015766964.2	+	1138	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0063	XM_015766964.2	-	1157	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0064	XM_015766964.2	-	1178	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0065	XM_015766964.2	-	1199	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0066	XM_015766964.2	-	1220	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0067	XM_015766964.2	-	1241	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0068	XM_015766964.2	-	1283	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0069	XM_015766964.2	+	1306	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X1	N/N
Osa-phasi01g0070	XM_015766966.2	+	524	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0071	XM_015766966.2	-	543	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0073	XM_015766966.2	+	546	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0074	XM_015766966.2	-	564	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0076	XM_015766966.2	+	567	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N
Osa-phasi01g0077	XM_015766966.2	-	585	LOC4326467	Chr1	+	uncharacterized LOC4326467, transcript variant X2	N/N