RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 9239

rows per page

Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0201	XR_003240320.1	-	1487	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0202	XR_003240320.1	+	1489	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/N
Osa-phasi01g0203	XR_003240320.1	-	1508	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0204	XR_003240320.1	+	1510	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0205	XR_003240320.1	+	1531	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/N
Osa-phasi01g0206	XR_003240320.1	-	1550	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0207	XR_003240320.1	-	1571	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0208	XR_003240320.1	+	1594	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0209	XR_003240320.1	-	1613	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/N
Osa-phasi01g0210	XR_003240320.1	-	1634	LOC112937652	Chr1	-	uncharacterized LOC112937652	N/Y
Osa-phasi01g0211	XR_003240318.1	+	230	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0212	XR_003240318.1	-	270	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0213	XR_003240318.1	+	293	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0214	XR_003240318.1	-	312	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0215	XR_003240318.1	-	333	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0216	XR_003240318.1	+	335	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0217	XR_003240318.1	+	356	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0218	XR_003240318.1	-	375	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0219	XR_003240318.1	+	377	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0220	XR_003240318.1	-	417	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0221	XR_003240318.1	-	438	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0222	XR_003240318.1	+	461	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0223	XR_003240318.1	+	482	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0224	XR_003240318.1	-	501	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0225	XR_003240318.1	+	503	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0226	XR_003240318.1	-	543	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0227	XR_003240318.1	-	564	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0228	XR_003240318.1	+	566	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0229	XR_003240318.1	+	608	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0230	XR_003240318.1	-	627	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0231	XR_003240318.1	-	648	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0232	XR_003240318.1	-	711	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0233	XR_003240318.1	+	1537	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0234	XR_003240318.1	-	1556	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0235	XR_003240318.1	+	1567	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0236	XR_003240318.1	-	1577	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0237	XR_003240318.1	+	1579	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0238	XR_003240318.1	+	1588	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0239	XR_003240318.1	-	1598	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0240	XR_003240318.1	+	1600	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0241	XR_003240318.1	-	1607	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0242	XR_003240318.1	+	1621	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0243	XR_003240318.1	+	1630	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0244	XR_003240318.1	+	1642	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0245	XR_003240318.1	-	1661	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0246	XR_003240318.1	+	1663	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0247	XR_003240318.1	+	1684	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0248	XR_003240318.1	+	1693	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0249	XR_003240318.1	-	1703	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0250	XR_003240318.1	+	1705	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0251	XR_003240318.1	-	1724	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0252	XR_003240318.1	-	1733	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0253	XR_003240318.1	-	1745	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0254	XR_003240318.1	+	1768	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/Y
Osa-phasi01g0255	XR_003240318.1	-	1829	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0256	XR_003240318.1	+	1831	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0257	XR_003240318.1	-	1955	LOC112937646	Chr1	-	uncharacterized LOC112937646	N/N
Osa-phasi01g0258	XM_015786481.2	-	768	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0259	XM_015786481.2	+	770	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0260	XM_015786481.2	-	831	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0261	XM_015786481.2	+	854	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0262	XM_015786481.2	-	894	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0263	XM_015786481.2	+	917	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0264	XM_015786481.2	-	957	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0265	XM_015786481.2	+	968	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0266	XM_015786481.2	-	1008	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0267	XM_015786481.2	+	1010	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0268	XM_015786481.2	-	1029	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0269	XM_015786481.2	-	1050	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0270	XM_015786481.2	-	1071	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0271	XM_015786481.2	+	1073	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0272	XM_015786481.2	-	1155	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X2	N/N
Osa-phasi01g0273	XM_015786474.2	-	763	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0274	XM_015786474.2	+	765	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0275	XM_015786474.2	-	826	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0276	XM_015786474.2	+	849	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0277	XM_015786474.2	-	889	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0278	XM_015786474.2	+	912	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0279	XM_015786474.2	-	952	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0280	XM_015786474.2	+	963	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0281	XM_015786474.2	-	1003	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0282	XM_015786474.2	+	1005	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0283	XM_015786474.2	-	1024	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0284	XM_015786474.2	-	1045	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0285	XM_015786474.2	-	1066	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0286	XM_015786474.2	+	1068	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0287	XM_015786474.2	-	1150	LOC9271331	Chr1	+	uncharacterized PKHD-type hydroxylase At1g22950, transcript variant X1	N/N
Osa-phasi01g0288	XM_026022538.1	-	203	LOC112937644	Chr1	+	zinc finger MYM-type protein 1-like	N/N
Osa-phasi01g0289	XM_026022538.1	-	207	LOC112937644	Chr1	+	zinc finger MYM-type protein 1-like	N/N
Osa-phasi01g0290	XM_026022538.1	-	270	LOC112937644	Chr1	+	zinc finger MYM-type protein 1-like	N/N
Osa-phasi01g0291	XM_026022538.1	+	272	LOC112937644	Chr1	+	zinc finger MYM-type protein 1-like	N/N
Osa-phasi01g0292	XM_026022538.1	-	287	LOC112937644	Chr1	+	zinc finger MYM-type protein 1-like	N/N
Osa-phasi01g0293	XM_026022538.1	-	291	LOC112937644	Chr1	+	zinc finger MYM-type protein 1-like	N/N
Osa-phasi01g0294	XM_026022538.1	+	310	LOC112937644	Chr1	+	zinc finger MYM-type protein 1-like	N/N
Osa-phasi01g0295	XM_026022538.1	-	312	LOC112937644	Chr1	+	zinc finger MYM-type protein 1-like	N/N
Osa-phasi01g0296	XM_026022538.1	+	352	LOC112937644	Chr1	+	zinc finger MYM-type protein 1-like	N/N
Osa-phasi01g0297	XM_026022538.1	+	398	LOC112937644	Chr1	+	zinc finger MYM-type protein 1-like	N/N
Osa-phasi01g0298	XM_026022538.1	-	413	LOC112937644	Chr1	+	zinc finger MYM-type protein 1-like	N/N
Osa-phasi01g0299	XM_015775384.2	-	1193	LOC107276816	Chr1	-	uncharacterized LOC107276816	N/N
Osa-phasi01g0300	XM_015775384.2	+	1258	LOC107276816	Chr1	-	uncharacterized LOC107276816	N/N