phasiRNAs Expression Capacity
total numbers: 8147
RiceNCexp estimates the expression capacities of lncRNAs PHAS genes, microRNAs and phasiRNAs based on their expression levels in rice (Oryza sativa). For a certain context, high capacity non-coding RNAs (HCR) are expressed at high expression levels in at least one sample (HEP > 0.0%), and Low capacity non-coding RNAs (LCR) are expressed at low expression levels in all samples (HEP = 0.0% and MEP = 0.0%). The remaining lncRNAs are medium-capacity ncRNAs (MCR) (HEP = 0.0% and MEP > 0.0%)
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
HCR: High-Capacity ncRNA; MCR: Medium-Capacity ncRNA; LCR: Low-Capacity ncRNA
| Name |
NE_num |
NEP |
LE_num |
LEP |
ME_num |
MEP |
HE_num |
HEP |
Expression Capacity |
| Osa-phasi08g0281 | 273 | 99.64% | 1 | 0.36% | 0 | 0.0% | 0 | 0.0% | LCR |
| Osa-phasi08g0284 | 272 | 99.27% | 0 | 0.0% | 2 | 0.73% | 0 | 0.0% | MCR |
| Osa-phasi08g0287 | 273 | 99.64% | 0 | 0.0% | 1 | 0.36% | 0 | 0.0% | MCR |
| Osa-phasi08g0320 | 273 | 99.64% | 1 | 0.36% | 0 | 0.0% | 0 | 0.0% | LCR |
| Osa-phasi08g0321 | 273 | 99.64% | 1 | 0.36% | 0 | 0.0% | 0 | 0.0% | LCR |
| Osa-phasi08g0322 | 273 | 99.64% | 1 | 0.36% | 0 | 0.0% | 0 | 0.0% | LCR |
| Osa-phasi08g0319 | 273 | 99.64% | 1 | 0.36% | 0 | 0.0% | 0 | 0.0% | LCR |