Browse: Expression Capacity

phasiRNAs Expression Capacity

total numbers: 8147

RiceNCexp estimates the expression capacities of lncRNAs PHAS genes, microRNAs and phasiRNAs based on their expression levels in rice (Oryza sativa). For a certain context, high capacity non-coding RNAs (HCR) are expressed at high expression levels in at least one sample (HEP > 0.0%), and Low capacity non-coding RNAs (LCR) are expressed at low expression levels in all samples (HEP = 0.0% and MEP = 0.0%). The remaining lncRNAs are medium-capacity ncRNAs (MCR) (HEP = 0.0% and MEP > 0.0%)

HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.

HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.

HCR: High-Capacity ncRNA; MCR: Medium-Capacity ncRNA; LCR: Low-Capacity ncRNA

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Name	NE_num	NEP	LE_num	LEP	ME_num	MEP	HE_num	HEP	Expression Capacity
Osa-phasi09g0761	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0755	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0757	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0759	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0756	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0758	273	99.64%	0	0.0%	1	0.36%	0	0.0%	MCR
Osa-phasi09g0760	273	99.64%	0	0.0%	1	0.36%	0	0.0%	MCR
Osa-phasi09g0714	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0715	273	99.64%	0	0.0%	1	0.36%	0	0.0%	MCR
Osa-phasi09g0716	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0717	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0719	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0720	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0718	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0721	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0768	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0766	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0767	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0769	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0765	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0763	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0764	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0762	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0710	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0711	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0712	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0713	273	99.64%	1	0.36%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0307	246	89.78%	12	4.38%	16	5.84%	0	0.0%	MCR
Osa-phasi09g0309	262	95.62%	3	1.09%	9	3.28%	0	0.0%	MCR
Osa-phasi09g0312	263	95.99%	7	2.55%	4	1.46%	0	0.0%	MCR
Osa-phasi09g0313	270	98.54%	2	0.73%	2	0.73%	0	0.0%	MCR
Osa-phasi09g0304	245	89.42%	27	9.85%	2	0.73%	0	0.0%	MCR
Osa-phasi09g0305	246	89.78%	1	0.36%	27	9.85%	0	0.0%	MCR
Osa-phasi09g0306	243	88.69%	3	1.09%	15	5.47%	13	4.74%	HCR
Osa-phasi09g0308	260	94.89%	2	0.73%	7	2.55%	5	1.82%	HCR
Osa-phasi09g0310	242	88.32%	2	0.73%	13	4.74%	17	6.2%	HCR
Osa-phasi09g0311	270	98.54%	1	0.36%	3	1.09%	0	0.0%	MCR
Osa-phasi09g0314	272	99.27%	0	0.0%	2	0.73%	0	0.0%	MCR
Osa-phasi09g0318	260	94.89%	3	1.09%	4	1.46%	7	2.55%	HCR
Osa-phasi09g0322	245	89.42%	12	4.38%	15	5.47%	2	0.73%	HCR
Osa-phasi09g0324	262	95.62%	2	0.73%	10	3.65%	0	0.0%	MCR
Osa-phasi09g0327	263	95.99%	5	1.82%	6	2.19%	0	0.0%	MCR
Osa-phasi09g0328	270	98.54%	1	0.36%	3	1.09%	0	0.0%	MCR
Osa-phasi09g0315	272	99.27%	2	0.73%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0316	267	97.45%	7	2.55%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0317	267	97.45%	7	2.55%	0	0.0%	0	0.0%	LCR
Osa-phasi09g0319	245	89.42%	20	7.3%	8	2.92%	1	0.36%	HCR
Osa-phasi09g0320	246	89.78%	0	0.0%	27	9.85%	1	0.36%	HCR
Osa-phasi09g0321	242	88.32%	3	1.09%	12	4.38%	17	6.2%	HCR
Osa-phasi09g0323	258	94.16%	2	0.73%	7	2.55%	7	2.55%	HCR