RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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total numbers: 9239

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Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi12g0522	XM_026021929.1	+	3814	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0523	XM_026021929.1	+	3856	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0524	XM_026021929.1	-	3875	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0525	XM_026021929.1	+	3877	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0526	XM_026021929.1	+	3898	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/Y
Osa-phasi12g0527	XM_026021929.1	+	3919	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/Y
Osa-phasi12g0528	XM_026021929.1	+	3940	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0529	XM_026021929.1	+	4939	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0530	XM_026021929.1	+	4960	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/Y
Osa-phasi12g0531	XM_026021929.1	-	5000	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/Y
Osa-phasi12g0532	XM_026021929.1	+	5002	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0533	XM_026021929.1	-	5021	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/Y
Osa-phasi12g0534	XM_026021929.1	-	5042	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/Y
Osa-phasi12g0535	XM_026021929.1	-	5063	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0536	XM_026021929.1	+	5086	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0537	XM_026021929.1	-	5147	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0538	XM_026021929.1	+	5212	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0539	XM_026021929.1	+	6525	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/Y
Osa-phasi12g0540	XM_026021929.1	+	6546	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/Y
Osa-phasi12g0541	XM_026021929.1	-	6586	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0542	XM_026021929.1	+	6588	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/Y
Osa-phasi12g0543	XM_026021929.1	-	6628	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0544	XM_026021929.1	+	6630	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0545	XM_026021929.1	-	6649	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/Y
Osa-phasi12g0546	XM_026021929.1	+	6714	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0547	XM_026021929.1	+	6735	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/Y
Osa-phasi12g0548	XM_026021929.1	+	6798	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X2	N/N
Osa-phasi12g0549	XM_026021930.1	+	4518	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0550	XM_026021930.1	-	4558	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0551	XM_026021930.1	-	4600	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0552	XM_026021930.1	+	4602	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0553	XM_026021930.1	-	4621	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0554	XM_026021930.1	+	4623	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0555	XM_026021930.1	-	4642	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0556	XM_026021930.1	+	4644	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0557	XM_026021930.1	-	4663	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0558	XM_026021930.1	-	4684	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0559	XM_026021930.1	+	4686	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0560	XM_026021930.1	+	4728	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0561	XM_026021930.1	-	4747	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0562	XM_026021930.1	+	4749	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0563	XM_026021930.1	+	4770	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0564	XM_026021930.1	+	4791	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0565	XM_026021930.1	+	4812	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0566	XM_026021930.1	+	5811	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0567	XM_026021930.1	+	5832	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0568	XM_026021930.1	-	5872	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0569	XM_026021930.1	+	5874	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0570	XM_026021930.1	-	5893	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0571	XM_026021930.1	-	5914	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0572	XM_026021930.1	-	5935	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0573	XM_026021930.1	+	5958	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0574	XM_026021930.1	-	6019	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0575	XM_026021930.1	+	6084	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0576	XM_026021930.1	+	7397	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0577	XM_026021930.1	+	7418	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0578	XM_026021930.1	-	7458	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0579	XM_026021930.1	+	7460	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0580	XM_026021930.1	-	7500	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0581	XM_026021930.1	+	7502	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0582	XM_026021930.1	-	7521	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0583	XM_026021930.1	+	7586	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0584	XM_026021930.1	+	7607	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/Y
Osa-phasi12g0585	XM_026021930.1	+	7670	LOC107276318	Chr12	+	calcium-dependent protein kinase 27-like, transcript variant X3	N/N
Osa-phasi12g0586	XR_003239901.1	+	862	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0587	XR_003239901.1	-	881	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0588	XR_003239901.1	+	883	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0589	XR_003239901.1	-	902	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0590	XR_003239901.1	+	904	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0591	XR_003239901.1	-	923	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0592	XR_003239901.1	+	925	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0593	XR_003239901.1	+	946	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0594	XR_003239901.1	+	967	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0595	XR_003239901.1	-	986	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0596	XR_003239901.1	-	1007	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0597	XR_003239901.1	+	1030	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0598	XR_003239901.1	-	1049	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0599	XR_003239901.1	+	1051	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0600	XR_003239901.1	-	1070	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0601	XR_003239901.1	+	1072	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0602	XR_003239901.1	+	1093	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0603	XR_003239901.1	+	1135	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0604	XR_003239901.1	-	1175	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0605	XR_003239901.1	-	1217	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0606	XR_003239901.1	-	3026	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0607	XR_003239901.1	+	3028	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0608	XR_003239901.1	-	3047	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0609	XR_003239901.1	+	3049	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0610	XR_003239901.1	-	3068	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0611	XR_003239901.1	+	3070	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0612	XR_003239901.1	-	3089	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0613	XR_003239901.1	+	3112	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0614	XR_003239901.1	+	3154	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0615	XR_003239901.1	-	3173	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0616	XR_003239901.1	+	3175	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0617	XR_003239901.1	-	3194	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0618	XR_003239901.1	+	3196	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0619	XR_003239901.1	+	3217	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N
Osa-phasi12g0620	XR_003239901.1	-	3236	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/Y
Osa-phasi12g0621	XR_003239901.1	-	3257	LOC112937361	Chr12	+	uncharacterized LOC112937361	N/N