RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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total numbers: 9239

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Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi11g1145	XR_001541615.2	+	4499	LOC4350978	Chr11	-	uncharacterized LOC4350978, transcript variant X6	N/Y
Osa-phasi11g1146	XR_001541615.2	-	4560	LOC4350978	Chr11	-	uncharacterized LOC4350978, transcript variant X6	N/Y
Osa-phasi11g1147	XR_001541615.2	+	4562	LOC4350978	Chr11	-	uncharacterized LOC4350978, transcript variant X6	N/N
Osa-phasi11g1148	XR_001541615.2	-	4581	LOC4350978	Chr11	-	uncharacterized LOC4350978, transcript variant X6	N/Y
Osa-phasi11g1149	XR_001541615.2	+	4583	LOC4350978	Chr11	-	uncharacterized LOC4350978, transcript variant X6	N/N
Osa-phasi11g1150	XR_001541615.2	-	4602	LOC4350978	Chr11	-	uncharacterized LOC4350978, transcript variant X6	N/Y
Osa-phasi11g1151	XR_001541615.2	-	4623	LOC4350978	Chr11	-	uncharacterized LOC4350978, transcript variant X6	N/N
Osa-phasi11g1152	XR_001541615.2	-	4644	LOC4350978	Chr11	-	uncharacterized LOC4350978, transcript variant X6	N/Y
Osa-phasi11g1153	XR_001541615.2	+	4646	LOC4350978	Chr11	-	uncharacterized LOC4350978, transcript variant X6	N/N
Osa-phasi11g1154	XR_001541615.2	-	4665	LOC4350978	Chr11	-	uncharacterized LOC4350978, transcript variant X6	N/Y
Osa-phasi11g1155	XR_001541615.2	-	4686	LOC4350978	Chr11	-	uncharacterized LOC4350978, transcript variant X6	N/Y
Osa-phasi11g1156	XR_003239493.1	+	1855	LOC9268641	Chr11	+	uncharacterized LOC9268641, transcript variant X2	N/N
Osa-phasi11g1157	XR_003239493.1	-	1874	LOC9268641	Chr11	+	uncharacterized LOC9268641, transcript variant X2	N/N
Osa-phasi11g1158	XR_003239493.1	+	1876	LOC9268641	Chr11	+	uncharacterized LOC9268641, transcript variant X2	N/Y
Osa-phasi11g1159	XR_003239493.1	+	1897	LOC9268641	Chr11	+	uncharacterized LOC9268641, transcript variant X2	N/N
Osa-phasi11g1160	XR_003239493.1	-	1916	LOC9268641	Chr11	+	uncharacterized LOC9268641, transcript variant X2	N/N
Osa-phasi11g1161	XR_003239493.1	+	1918	LOC9268641	Chr11	+	uncharacterized LOC9268641, transcript variant X2	N/N
Osa-phasi11g1162	XR_003239493.1	+	1939	LOC9268641	Chr11	+	uncharacterized LOC9268641, transcript variant X2	N/Y
Osa-phasi11g1163	XR_003239493.1	-	1979	LOC9268641	Chr11	+	uncharacterized LOC9268641, transcript variant X2	N/Y
Osa-phasi11g1164	XR_003239493.1	+	1981	LOC9268641	Chr11	+	uncharacterized LOC9268641, transcript variant X2	N/Y