What is SoyNcRNAExp?

SoyNcRNAExp collected 4,179 Long non-coding RNAs (lncRNAs), 1,245 microRNAs (miRNAs), 12,970 phased siRNAs (phasiRNAs) and 451 PHAS/TAS genes. In addition, 3,747 transcription factors (TFs), 135 RNA-binding proteins (RBPs) and other 52,297 protein-coding genes were also collected for constructing ncRNA co-expression networks to expand ncRNA-centerred networks comprising more gene expression regulators.

SoyNcRNAExp contains four major functionalities: ncRNA expression, ncRNA differential expression, ncRNA mining, and ncRNA co-expression. SoyNcRNAExp is the first comprehensive resource for soybean ncRNA expression and co-expression analysis, which may greatly promote soybean ncRNA studies for soybean research community.