RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miRN53	RiceNCexp	Chr9	13552789	13552809	+	N/N
Osa-miRN54	RiceNCexp	Chr9	18289181	18289201	-	N/N
Osa-miRN55	RiceNCexp	Chr9	19647846	19647866	-	N/N
Osa-miRN56	RiceNCexp	Chr9	19792262	19792282	+	Y/Y
Osa-miRN57	RiceNCexp	Chr10	10505987	10506007	+	N/N
Osa-miRN58	RiceNCexp	Chr10	14483304	14483324	-	Y/Y
Osa-miRN59	RiceNCexp	Chr10	21237417	21237438	+	Y/N
Osa-miRN60	RiceNCexp	Chr11	2191306	2191325	+	Y/N
Osa-miRN61	RiceNCexp	Chr11	7807330	7807350	+	N/Y
Osa-miRN62	RiceNCexp	Chr11	7810505	7810525	+	N/N
Osa-miRN63	RiceNCexp	Chr11	8963236	8963256	+	N/N
Osa-miRN64	RiceNCexp	Chr11	11916678	11916698	+	N/N
Osa-miRN65	RiceNCexp	Chr11	19480163	19480184	+	Y/Y
Osa-miRN66	RiceNCexp	Chr11	19480234	19480253	+	N/Y
Osa-miRN67	RiceNCexp	Chr12	1970855	1970876	+	N/N
Osa-miRN68	RiceNCexp	Chr12	3611887	3611908	+	N/N
Osa-miRN69	RiceNCexp	Chr12	8866347	8866367	+	Y/N
Osa-miRN70	RiceNCexp	Chr12	9499637	9499656	-	N/N
Osa-miRN71	RiceNCexp	Chr12	18329479	18329500	+	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miRN53

RiceNCexp

Chr9