RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miRN33	RiceNCexp	Chr4	25026401	25026420	-	Y/Y
Osa-miRN34	RiceNCexp	Chr4	26976691	26976711	-	N/N
Osa-miRN35	RiceNCexp	Chr4	27823597	27823617	-	N/N
Osa-miRN36	RiceNCexp	Chr4	29042291	29042310	+	Y/N
Osa-miRN37	RiceNCexp	Chr4	33303616	33303635	+	Y/N
Osa-miRN38	RiceNCexp	Chr4	34236111	34236130	-	Y/N
Osa-miRN39	RiceNCexp	Chr5	5230736	5230756	+	Y/Y
Osa-miRN40	RiceNCexp	Chr5	26311266	26311287	+	N/N
Osa-miRN41	RiceNCexp	Chr6	673536	673555	-	N/N
Osa-miRN42	RiceNCexp	Chr6	17877817	17877837	-	N/N
Osa-miRN43	RiceNCexp	Chr6	26554835	26554856	+	Y/Y
Osa-miRN44	RiceNCexp	Chr7	2216843	2216862	-	Y/N
Osa-miRN45	RiceNCexp	Chr8	1707574	1707594	+	Y/N
Osa-miRN46	RiceNCexp	Chr8	23072750	23072771	+	N/N
Osa-miRN47	RiceNCexp	Chr8	23072797	23072818	-	N/N
Osa-miRN48	RiceNCexp	Chr8	26807360	26807381	+	Y/Y
Osa-miRN49	RiceNCexp	Chr8	26814007	26814027	+	Y/N
Osa-miRN50	RiceNCexp	Chr8	26817569	26817589	+	Y/N
Osa-miRN51	RiceNCexp	Chr9	3969825	3969845	+	N/N
Osa-miRN52	RiceNCexp	Chr9	8126542	8126561	-	N/Y

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miRN33

RiceNCexp

Chr4