RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miRN13	RiceNCexp	Chr1	12301814	12301833	+	Y/N
Osa-miRN14	RiceNCexp	Chr1	14130486	14130507	+	N/N
Osa-miRN15	RiceNCexp	Chr1	18049428	18049448	+	N/N
Osa-miRN16	RiceNCexp	Chr1	22524220	22524239	-	Y/N
Osa-miRN17	RiceNCexp	Chr1	39048236	39048255	+	N/N
Osa-miRN18	RiceNCexp	Chr1	41260752	41260771	-	Y/N
Osa-miRN19	RiceNCexp	Chr2	4345573	4345594	+	N/N
Osa-miRN20	RiceNCexp	Chr2	18307627	18307646	-	N/N
Osa-miRN21	RiceNCexp	Chr2	18942099	18942118	-	N/N
Osa-miRN22	RiceNCexp	Chr2	24120061	24120081	-	Y/Y
Osa-miRN23	RiceNCexp	Chr2	25135004	25135024	-	Y/N
Osa-miRN24	RiceNCexp	Chr2	27148168	27148188	+	Y/N
Osa-miRN25	RiceNCexp	Chr2	31205965	31205984	-	Y/Y
Osa-miRN26	RiceNCexp	Chr2	34280395	34280414	+	Y/Y
Osa-miRN27	RiceNCexp	Chr3	22088085	22088104	-	N/N
Osa-miRN28	RiceNCexp	Chr3	25574715	25574736	+	N/N
Osa-miRN29	RiceNCexp	Chr3	31059086	31059106	-	N/Y
Osa-miRN30	RiceNCexp	Chr3	32454996	32455015	+	Y/N
Osa-miRN31	RiceNCexp	Chr3	33130637	33130656	+	N/Y
Osa-miRN32	RiceNCexp	Chr4	19420175	19420194	+	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miRN13

RiceNCexp

Chr1