RiceNCexp:Browse

There are 738 and 699 rice mature miRNAs in miRbase and PmiREN, respectively. We merged the miRNAs of the two databases by name and sequence of the miRNA. After merging, we collected a total of 1228 rice mature miRNAs and used different suffixes to distinguish their sources. The "_Both" suffix indicates that the miRNA comes from both the miRbase and the PmiREN. The "_miRbase" suffix indicates that the miRNA is only from the miRbase, and the "_PmiREN" suffix indicates that the miRNA is only from the PmiREN. In addition, 71 novel miRNAs were predicted by RiceNCexp and suffixed with "_RiceNCexp". Therefore, RiceNCexp contains a total of 1299 rice miRNAs.

Tip: If you want to search for a certain ncRNA in RiceNCexp, please select "all rows per page" to show all entries and retrieve it in the search box.

Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 1299

Name	Database	Chromosome	Start	End	Strand	DE/TSE
Osa-miR812am	PmiREN	Chr6	21245498	21245521	-	Y/Y
Osa-miR812aj	PmiREN	Chr2	27756493	27756516	+	Y/N
Osa-miR166i	PmiREN	Chr3	25295065	25295085	+	Y/N
Osa-miRN2295	PmiREN	Chr12	24290567	24290587	+	N/Y
Osa-miRN2297	PmiREN	Chr12	21727741	21727761	-	N/Y
Osa-miRN2296	PmiREN	Chr12	24862194	24862214	+	Y/Y
Osa-miR5152a	PmiREN	Chr5	28910228	28910248	-	N/N
Osa-miR812ah	PmiREN	Chr3	35561723	35561746	-	Y/Y
Osa-miRN2293	PmiREN	Chr4	18680363	18680382	-	N/Y
Osa-miR5152b	PmiREN	Chr5	29148351	29148371	+	N/N
Osa-miR482	PmiREN	Chr4	21654404	21654425	-	Y/Y
Osa-miR812ai	PmiREN	Chr12	24677388	24677411	+	Y/N
Osa-miRN2299	PmiREN	Chr12	21011265	21011285	-	N/Y
Osa-miRN2336	PmiREN	Chr12	16207990	16208010	+	N/Y
Osa-miRN2334	PmiREN	Chr10	3705965	3705985	+	N/N
Osa-miR812ar	PmiREN	Chr10	19333224	19333243	+	Y/N
Osa-miRN2173	PmiREN	Chr7	16257970	16257990	+	N/N
Osa-miR531e	PmiREN	Chr5	8564911	8564932	-	Y/N
Osa-miR812ap	PmiREN	Chr7	16750018	16750039	-	Y/N
Osa-miR812aq	PmiREN	Chr1	27167165	27167186	+	Y/N

Name

Database

Confidence

Chromosome

Start

End

Strand

DE/TSE

Detail

Osa-miR812am

PmiREN

Chr6