DPMIND

Species > Arabidopsis_thaliana > ath-miR840-5p

Mature miRNA ath-miR840-5p:

> ath-miR840-5p|50..71
ACACUGAAGGACCUAAACUAAC

Pre-miRNA ath-miR840:

> ath-miR840|Chr 2: 771337..771562
CGUAAAGCAGGUGAUUCACCAAUUUAGGUUUACAUCCACAGUGUGGAAGACACUGAAGGACCUAAACUAACAAAG
GUAAACGGCUCAGUGUGCGGGGUAUUACACUCGGUUUAAUGUCUGAAUGCGAUAAUCCGCACGAUGAUCUCUUUA
UCUUUGUUUGUUUAGGUCCCUUAGUUUCUUCUAUACCGUGAAUCCAAUCCUGUAUUGGAUGAGCUGGUUUAUGAC
C

More information:

miRBase

Verified Target Gene:

View the interactions between ath-miR840-5p and its Targets

Experimental Evidences:

454 [1-2], cloned [2]

References:

[1] "A diverse and evolutionarily fluid set of microRNAs in Arabidopsisthaliana"; Rajagopalan R, Vaucheret H, Trejo J, Bartel DP; Genes Dev. 20:3407-3425(2006).
[2] "High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"; Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC; PLoS One. 2:e219(2007).
[3] "Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots"; Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA; BMC Genomics. 14:701(2013).