This database provide the degradome-based verified interactions between miRNAs and their targets.
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BLAST
Please Input or upload the sequences
with fasta format
here to search for the most similar miRNAs or target genes sequence which are stored in database
(max size 1000 nts)
. You can choose to search mature miRNA or target gene sequences. This search may take a few minutes. Note: this facility is designed to search for miRNAs or target genes by sequence,
not to predict their target sites
. For target site prediction, please use the results of Blast and click the [more].
Search sequences:
target_gene
mature_miRNAs
Choose species:
Arabidopsis_thaliana
Glycine_max
Gossypium_raimondii
Hordeum_vulgare
Medicago_truncatula
Oryza_sativa
Solanum_lycopersicum
Solanum_tuberosum
Triticum_aestivum
Zea_mays
E-value cutoff:
1e-1
1e-5
1e-10
1e-15
1e-20
1e-25
1e-30
Max sequences for each search :
5
10
15
20
25
30
35
40
