DPMIND

Species > Arabidopsis_thaliana > ath-miR829-5p

Mature miRNA ath-miR829-5p:

> ath-miR829-5p|54..74
ACUUUGAAGCUUUGAUUUGAA

Pre-miRNA ath-miR829:

> ath-miR829|Chr 1: 11834022..11834226
ACGUCAAAAUUGAUUAACAAAAAGUCAAUGAAUCAUUCUACCAAUUGACUUGUACUUUGAAGCUUUGAUUUGAAC
CUGUCAAUUGGUAUCAAAGCUUCUAAAUCUUUGAAGCUCUGAUACCAAAUGAUGGAAUCAAAUUAAAGCUUCAAG
GUAGUAGUCAUCUUGGCAGAGAAAAGAAAAAGCACUUCGAGUUUACCAUCUUGAU

More information:

miRBase

Verified Target Gene:

View the interactions between ath-miR829-5p and its Targets

Experimental Evidences:

Illumina [4]

References:

[1] "A diverse and evolutionarily fluid set of microRNAs in Arabidopsisthaliana"; Rajagopalan R, Vaucheret H, Trejo J, Bartel DP; Genes Dev. 20:3407-3425(2006).
[2] "High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"; Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC; PLoS One. 2:e219(2007).
[3] "Hypoxia-responsive microRNAs and trans-acting small interfering RNAs inArabidopsis"; Moldovan D, Spriggs A, Yang J, Pogson BJ, Dennis ES, Wilson IW; J Exp Bot. 61:165-177(2010).
[4] "Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots"; Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA; BMC Genomics. 14:701(2013).