Chr:
Chr5
Start:
28577946
End:
28577969
Strand:
+
Sequence:
UAGUCAAACUUAGAAUAGUUGGAC
Length:
24
precursor sequence:
UUUGGUCAAAUUUAAACUACUCUAAGUUUAACUAAUUUUAUAAAAAGAUAGUAAUAUUUUAAAUAAAUUUUCAUAAUAUAUUUAUUUUGGGUUAAAAAUAUUACUACUUUUUUCUAUAAAAUUAGUCAAACUUAGAAUAGUUGGACUUUAACUAAA
HE: High-Expressed (TPM > upper quantile); ME: Medium-Expressed (TPM < upper quantile and TPM > lower quantile); LE: Low-Expressed (TPM < lower quantile); NE: Not Expressed.
HEP: High-Expressed Percentage; MEP: Medium-Expressed Percentage; LEP: Low-Expressed Percentage; NEP: Not Expressed Percentage.
NE_num:
137
NEP:
50.0%
LE_num:
LEP:
21.9%
ME_num:
MEP:
28.1%
HE_num:
HEP:
0.0%
Type:
MCR ()
cutoff: tau > 0.9 and Average expression in the tissue > 10
Tissue :
panicle
Tau :
0.66
Avg Expression:
0.61
cutoff: log2(fold change) > 1 or log2(fold change) < -1 and p-adj < 0.01
Num. | Condition | log2(FoldChange) | Padj |
---|---|---|---|
1 | japonica // shoot_base // WT_base--/--japonica // shoot_base // osnrpd1ab_base | -6.18357597190364 | 3.0744024278578e-05 |