| SRR5120079 | leaf_sheath | PC_0 | 0.87 | MC |
| SRR7058097 | leaf | rice_mock | 0.83 | MC |
| SRR7058098 | leaf | rice_RSV | 0.48 | MC |
| SRR2154070 | seed | Guangluai4_seed | 0.25 | MC |
| SRR4098204 | seedling | Drought (air-dried) | 0.25 | MC |
| SRR1061625 | panicle | Heat Stress | 0.40 | MC |
| SRR3955345 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.96 | MC |
| SRR9070101 | shoot_base | WT_base | 0.59 | MC |
| SRR089619 | panicle | control | 0.67 | MC |
| SRR1849765 | leaf | Control 30min | 0.90 | MC |
| SRR5929446 | leaf | "O sativa, IL, adapters: standard" | 0.51 | MC |
| SRR6498702 | leaf | "WT, M. oryzae Infected" | 0.72 | MC |
| SRR771496 | shoot | Shoot Cultivar Nipponbare RSF | 0.77 | MC |
| SRR771497 | shoot | Shoot Cultivar Nipponbare RSG | 0.60 | MC |
| SRR3955339 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.24 | MC |
| SRR3955338 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.35 | MC |
| SRR3955337 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.78 | MC |
| SRR7058096 | leaf | rice_mock | 0.76 | MC |
| SRR1742988 | endosperm | 4X_En_sRNA | 0.08 | MC |
| SRR2154081 | seedling | Taipei309_seedling | 0.56 | MC |
| SRR5049790 | ovary | floret length/mm: 3.1-3.3 | 0.65 | MC |
| SRR3955359 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.52 | MC |
| SRR5120084 | leaf_sheath | P15_48 | 0.83 | MC |
| SRR3955358 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.24 | MC |
| SRR5120082 | leaf_sheath | P15_0 | 0.69 | MC |
| SRR976171 | lamina_joint | wild type | 4.11 | MC |
| SRR4098208 | root | No treatment | 0.45 | MC |
| SRR4098209 | leaf | No treatment | 0.82 | MC |
| SRR3955348 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.87 | MC |
| SRR3955349 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 0.81 | MC |
| SRR9070100 | shoot_base | WT_base | 0.52 | MC |
| SRR4098205 | seedling | Heat (50C) | 0.48 | MC |
| SRR3955342 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 0.41 | MC |
| SRR3955343 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.90 | MC |
| SRR3955340 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 0.72 | MC |
| SRR1742992 | endosperm | 2X4_En_sRNA | 0.21 | MC |
| SRR1742991 | endosperm | 2X4_En_sRNA | 0.30 | MC |
| SRR4098206 | seedling | Highlight (50000 Lux) | 1.44 | MC |
| SRR8649147 | panicle | panicle tissue | 0.87 | MC |
| SRR3955354 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.17 | MC |
| SRR9070102 | shoot_base | WT_base | 0.43 | MC |
| SRR3955350 | panicle | "0.5-1.0 cm panicles, long-day growth conditions" | 1.21 | MC |
| SRR3955353 | panicle | "3.0-4.0 mm florets, long-day growth conditions" | 1.23 | MC |
| SRR3234045 | pollen | floret length/mm: 5.50-6.00 | 0.43 | MC |
| SRR4098203 | seedling | No treatment | 1.23 | MC |
| SRR5049780 | anther | floret length/mm: 5.0-5.5 | 0.55 | MC |
| SRR6365693 | panicle | Wild type | 0.34 | MC |
| SRR5049788 | ovary | floret length/mm: 5.0-5.5 | 1.56 | MC |
| SRR5049789 | ovary | floret length/mm: >6.5 | 0.15 | MC |
| SRR3110556 | shoot | shoot control | 0.83 | MC |
| SRR3955360 | panicle | "3.0-4.0 mm florets, short-day growth conditions" | 0.63 | MC |
| SRR771495 | root | Root Cultivar Nipponbare RRG | 0.95 | MC |
| SRR1061616 | panicle | Normal | 0.16 | MC |
| SRR1061617 | panicle | Heat Stress | 0.24 | MC |
| SRR1061612 | panicle | Normal | 0.44 | MC |
| SRR1061613 | panicle | Heat Stress | 0.47 | MC |
| SRR3955355 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 0.72 | MC |
| SRR4098202 | seedling | High-salt (300 mM NaCl) | 0.59 | MC |
| SRR3955346 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 1.29 | MC |
| SRR2544788 | embryo | 24 hours imbibition | 0.49 | MC |
| SRR3955344 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 1.92 | MC |
| SRR089621 | panicle | cold | 1.80 | MC |
| SRR089620 | panicle | drought | 1.41 | MC |
| SRR089622 | panicle | salt | 1.08 | MC |
| SRR504360 | leaf | Nipponbare | 4.35 | MC |
| SRR2544787 | embryo | 12 hours imbibition | 0.37 | MC |
| SRR3955357 | panicle | "1.0-2.0 cm panicles, short-day growth conditions" | 0.64 | MC |
| SRR10956502 | panicle | WT | 0.48 | MC |
| SRR10956501 | panicle | WT | 0.50 | MC |
| SRR5120081 | leaf_sheath | PC_48 | 0.59 | MC |
| SRR3955356 | panicle | "0.5-1.0 cm panicles, short-day growth conditions" | 2.01 | MC |
| SRR3955351 | panicle | "1.0-2.0 cm panicles, long-day growth conditions" | 1.66 | MC |
| SRR5049791 | ovary | floret length/mm: 4.3-4.5 | 0.50 | MC |
| SRR3110557 | shoot | shoot treated | 0.89 | MC |
| SRR5940086 | panicle | Wild type | 0.52 | MC |
| SRR771501 | embryo | Embryo Cultivar Kitaake KEA | 0.48 | MC |
| SRR504362 | leaf | NPB X 93-11 | 3.51 | MC |